核磁共振波谱法探测生物分子液-液相分离驱动力。

Hanyu Zhang, Weiwei Fan, Gilbert Nshogoza, Yaqian Liu, Jia Gao, Jihui Wu, Yunyu Shi, Xiaoming Tu, Jiahai Zhang, Ke Ruan
{"title":"核磁共振波谱法探测生物分子液-液相分离驱动力。","authors":"Hanyu Zhang,&nbsp;Weiwei Fan,&nbsp;Gilbert Nshogoza,&nbsp;Yaqian Liu,&nbsp;Jia Gao,&nbsp;Jihui Wu,&nbsp;Yunyu Shi,&nbsp;Xiaoming Tu,&nbsp;Jiahai Zhang,&nbsp;Ke Ruan","doi":"10.52601/bpr.2022.210034","DOIUrl":null,"url":null,"abstract":"<p><p>The assembly of biomolecular condensates is driven by liquid-liquid phase separation. To understand the structure and functions of these condensates, it is essential to characterize the underlying driving forces, <i>e</i>.<i>g</i>., protein-protein and protein-RNA interactions. As both structured and low-complexity domains are involved in the phase separation process, NMR is probably the only technique that can be used to depict the binding topology and interaction modes for the structured and nonstructured domains simultaneously. Atomic-resolution analysis for the intramolecular and intermolecular interactions between any pair of components sheds light on the mechanism for phase separation and biomolecular condensate assembly and disassembly. Herein, we describe the procedures used for the most extensively employed NMR techniques to characterize key interactions for biomolecular phase separation.</p>","PeriodicalId":59621,"journal":{"name":"生物物理学报:英文版","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2022-04-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10195809/pdf/","citationCount":"0","resultStr":"{\"title\":\"Driving force of biomolecular liquid-liquid phase separation probed by nuclear magnetic resonance spectroscopy.\",\"authors\":\"Hanyu Zhang,&nbsp;Weiwei Fan,&nbsp;Gilbert Nshogoza,&nbsp;Yaqian Liu,&nbsp;Jia Gao,&nbsp;Jihui Wu,&nbsp;Yunyu Shi,&nbsp;Xiaoming Tu,&nbsp;Jiahai Zhang,&nbsp;Ke Ruan\",\"doi\":\"10.52601/bpr.2022.210034\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The assembly of biomolecular condensates is driven by liquid-liquid phase separation. To understand the structure and functions of these condensates, it is essential to characterize the underlying driving forces, <i>e</i>.<i>g</i>., protein-protein and protein-RNA interactions. As both structured and low-complexity domains are involved in the phase separation process, NMR is probably the only technique that can be used to depict the binding topology and interaction modes for the structured and nonstructured domains simultaneously. Atomic-resolution analysis for the intramolecular and intermolecular interactions between any pair of components sheds light on the mechanism for phase separation and biomolecular condensate assembly and disassembly. Herein, we describe the procedures used for the most extensively employed NMR techniques to characterize key interactions for biomolecular phase separation.</p>\",\"PeriodicalId\":59621,\"journal\":{\"name\":\"生物物理学报:英文版\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-04-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10195809/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"生物物理学报:英文版\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.52601/bpr.2022.210034\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"生物物理学报:英文版","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.52601/bpr.2022.210034","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

生物分子凝聚体的组装是由液-液相分离驱动的。为了了解这些凝聚物的结构和功能,有必要描述潜在的驱动力,例如蛋白质-蛋白质和蛋白质- rna相互作用。由于相分离过程涉及结构域和低复杂度域,因此核磁共振可能是唯一可以同时描述结构域和非结构域的结合拓扑和相互作用模式的技术。分子内和分子间相互作用的原子分辨率分析揭示了相分离和生物分子凝聚物组装和拆卸的机制。在这里,我们描述了用于最广泛使用的核磁共振技术来表征生物分子相分离的关键相互作用的程序。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

摘要图片

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Driving force of biomolecular liquid-liquid phase separation probed by nuclear magnetic resonance spectroscopy.

The assembly of biomolecular condensates is driven by liquid-liquid phase separation. To understand the structure and functions of these condensates, it is essential to characterize the underlying driving forces, e.g., protein-protein and protein-RNA interactions. As both structured and low-complexity domains are involved in the phase separation process, NMR is probably the only technique that can be used to depict the binding topology and interaction modes for the structured and nonstructured domains simultaneously. Atomic-resolution analysis for the intramolecular and intermolecular interactions between any pair of components sheds light on the mechanism for phase separation and biomolecular condensate assembly and disassembly. Herein, we describe the procedures used for the most extensively employed NMR techniques to characterize key interactions for biomolecular phase separation.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
1.30
自引率
0.00%
发文量
117
期刊最新文献
Multi-phase separation in mitochondrial nucleoids and eukaryotic nuclei. Synergistic glycolysis disturbance for cancer therapy by a MOF-based nanospoiler. M6A RNA methylation modification and tumor immune microenvironment in lung adenocarcinoma. Antioxidant activity of the thioredoxin system. The risk model construction of the genes regulated by H3K36me3 and H3K79me2 in breast cancer.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1