用汉森溶解度参数和预测pKa值预测眼部刺激。

IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Atla-Alternatives To Laboratory Animals Pub Date : 2023-05-01 DOI:10.1177/02611929231175676
Martin Andersson, Ulf Norinder, Swapnil Chavan, Ian Cotgreave
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引用次数: 1

摘要

根据联合国GHS系统,一种计算机方法已经开发出来,可以将造成严重眼睛损伤或眼睛刺激的纯液体与无需进行此类分类的纯液体进行二元区分。该方法是基于发现液体的汉森溶解度参数(HSP)是对眼睛刺激的重要预测因素。因此,通过应用两层方法(首先是计算机预测的pKa值)和仅基于计算机预测的HSP数据(其次)的训练模型(第二层),我们开发并验证了一种完全计算机化的方法,用于预测Draize测试的结果(根据联合国GHS Cat. 1/Cat. 1)。2 /猫。b或UN GHS No Cat),仅使用SMILES即可获得高验证集性能(灵敏度= 0.846,特异性= 0.818,平衡准确性= 0.832)。该方法适用于分子量低于500g /mol,氢键供体(如氮-氢或氧-氢键)少于6个,氢键受体(如氮或氧原子)少于11个的纯非离子液体。由于其完全的硅化特性,该方法可以应用于仍处于桌面设计阶段且尚未投入生产的纯液体。
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In Silico Prediction of Eye Irritation Using Hansen Solubility Parameters and Predicted pKa Values.

An in silico method has been developed that permits the binary differentiation between pure liquids causing serious eye damage or eye irritation, and pure liquids with no need for such classification, according to the UN GHS system. The method is based on the finding that the Hansen Solubility Parameters (HSP) of a liquid are collectively important predictors for eye irritation. Thus, by applying a two-tier approach in which in silico-predicted pKa values (firstly) and a trained model based solely on in silico-predicted HSP data (secondly) were used, we have developed, and validated, a fully in silico approach for predicting the outcome of a Draize test (in terms of UN GHS Cat. 1/Cat. 2A/Cat. 2B or UN GHS No Cat.) with high validation set performance (sensitivity = 0.846, specificity = 0.818, balanced accuracy = 0.832) using SMILES only. The method is applicable to pure non-ionic liquids with molecular weight below 500 g/mol, fewer than six hydrogen bond donors (e.g. nitrogen-hydrogen or oxygen-hydrogen bonds) and fewer than eleven hydrogen bond acceptors (e.g. nitrogen or oxygen atoms). Due to its fully in silico characteristics, this method can be applied to pure liquids that are still at the desktop design stage and not yet in production.

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来源期刊
CiteScore
3.80
自引率
3.70%
发文量
60
审稿时长
>18 weeks
期刊介绍: Alternatives to Laboratory Animals (ATLA) is a peer-reviewed journal, intended to cover all aspects of the development, validation, implementation and use of alternatives to laboratory animals in biomedical research and toxicity testing. In addition to the replacement of animals, it also covers work that aims to reduce the number of animals used and refine the in vivo experiments that are still carried out.
期刊最新文献
Introducing the COST Action 'Improving the Quality of Biomedical Science with 3Rs Concepts' (IMPROVE). Journeying Through Journals: The Publishing Process and How to Maximise Research Impact. Progress and Remaining Opportunities to Increase the Use of Animal-free Antibodies in the USA. Editorial. An Evaluation of the Replacement of Animal-derived Biomaterials in Human Primary Cell Culture.
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