在肯尼亚建立生物信息学和开放科学技能的意识和能力:一个提高认识、培训、破解和合作的模式。

Pauline Karega, David K Mwaura, Kennedy W Mwangi, Margaret Wanjiku, Michael Landi, Caleb K Kibet
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引用次数: 1

摘要

我们已经应用了敏化-培训-黑客-社区模式在肯尼亚建立对生物信息学的认识和能力。开放科学是开放和协作的科学实践,工具、技术和数据自由共享,以促进重用和协作。开放科学不是学校的必修课,而生物信息学在一些非洲地区相对较新。开放科学工具可以显著增强生物信息学,从而提高可重复性。然而,资源受限地区的学生和研究人员仍然缺乏开放科学和生物信息学技能,特别是混合技能。我们注意到有必要意识到开放科学在生物信息学社区中的力量,并制定一个明确的战略来学习生物信息学和开放科学技能,以便在研究中使用。BOSS(生物信息学和开放科学技能)虚拟活动利用OpenScienceKE框架——敏感化、培训、Hack、协作/社区——建立了意识,并赋予研究人员开放科学和生物信息学方面的技能和工具。通过专题讨论会、通过讲习班和培训教员计划进行培训、通过小型项目进行hack、通过社区会议和持续的会面来提高认识。在本文中,我们讨论了我们如何在BOSS事件中应用该框架,并强调了在计划和执行事件及其对每个阶段结果的影响中吸取的教训。我们通过匿名调查来评估事件的影响。我们表明,当参与者将技能应用于现实世界的问题:基于项目的学习时,使研究人员具有敏感性并赋予他们技能的效果最好。此外,我们还演示了如何通过为参与者提供互联网和设备支持,在资源受限的环境中实现虚拟事件,从而提高可及性和多样性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model.

We have applied the sensitize-train-hack-community model to build awareness of and capacity in bioinformatics in Kenya. Open science is the practice of science openly and collaboratively, with tools, techniques, and data freely shared to facilitate reuse and collaboration. Open science is not a mandatory curriculum course in schools, whereas bioinformatics is relatively new in some African regions. Open science tools can significantly enhance bioinformatics, leading to increased reproducibility. However, open science and bioinformatics skills, especially blended, are still lacking among students and researchers in resource-constrained regions. We note the need to be aware of the power of open science among the bioinformatics community and a clear strategy to learn bioinformatics and open science skills for use in research. Using the OpenScienceKE framework-Sensitize, Train, Hack, Collaborate/Community-the BOSS (Bioinformatics and Open Science Skills) virtual events built awareness and empowered researchers with the skills and tools in open science and bioinformatics. Sensitization was achieved through a symposium, training through a workshop and train-the-trainer program, hack through mini-projects, community through conferences, and continuous meet-ups. In this paper, we discuss how we applied the framework during the BOSS events and highlight lessons learnt in planning and executing the events and their impact on the outcome of each phase. We evaluate the impact of the events through anonymous surveys. We show that sensitizing and empowering researchers with the skills works best when the participants apply the skills to real-world problems: project-based learning. Furthermore, we have demonstrated how to implement virtual events in resource-constrained settings by providing Internet and equipment support to participants, thus improving accessibility and diversity.

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