数据科学方法为理解脱落酸在防御中的作用提供了路线图。

Katie Stevens, Iain G Johnston, Estrella Luna
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引用次数: 1

摘要

脱落酸(ABA)是一种调控非生物胁迫反应的植物激素。ABA也因其在生物防御中的作用而得到认可,但目前对其是否发挥积极或消极作用缺乏共识。在这里,我们使用监督机器学习来分析ABA防御作用的实验观察,以确定决定疾病表型的最具影响力的因素。在我们的计算预测中,ABA浓度,植物年龄和病原体生活方式被确定为防御行为的重要调节因子。我们在番茄上进行了新的实验,证明了ABA处理后的表型确实高度依赖于植物年龄和病原体生活方式。将这些新结果整合到统计分析中,完善了ABA影响的定量模型,为提出和开发进一步的研究提出了一个框架,以在这个复杂的问题上取得更多进展。我们的方法提供了一个统一的路线图,以指导涉及ABA在防御中的作用的未来研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Data science approaches provide a roadmap to understanding the role of abscisic acid in defence.

Abscisic acid (ABA) is a plant hormone well known to regulate abiotic stress responses. ABA is also recognised for its role in biotic defence, but there is currently a lack of consensus on whether it plays a positive or negative role. Here, we used supervised machine learning to analyse experimental observations on the defensive role of ABA to identify the most influential factors determining disease phenotypes. ABA concentration, plant age and pathogen lifestyle were identified as important modulators of defence behaviour in our computational predictions. We explored these predictions with new experiments in tomato, demonstrating that phenotypes after ABA treatment were indeed highly dependent on plant age and pathogen lifestyle. Integration of these new results into the statistical analysis refined the quantitative model of ABA influence, suggesting a framework for proposing and exploiting further research to make more progress on this complex question. Our approach provides a unifying road map to guide future studies involving the role of ABA in defence.

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