贵州土家族23个STR基因座的遗传多样性及其与其他22个人群的系统发育关系

IF 1.2 4区 医学 Q2 ANTHROPOLOGY Annals of Human Biology Pub Date : 2023-02-01 DOI:10.1080/03014460.2023.2224971
Shuhua Li, Siyu Chai, Limei Yu, Tao Zhang, Zulin Liu, Yinlei Lei, Kaiqin Chen, Hao Zhang, YanFei Liu, Pengyu Chen
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引用次数: 0

摘要

背景:短串联重复序列(STR)是一种高度多态性的DNA标记,用于法医鉴定和人类群体遗传研究。贵州土家族是中国西南地区古代少数民族之一,但目前尚未使用23 STR华夏白金试剂盒对其进行研究。目的:获取贵州土家23例常染色体STRs的遗传资料,并探讨其与其他人群的亲缘关系。对象和方法:采用华夏白金试剂盒23个STR基因座对480例贵州土家族人群进行分析。估计等位基因频率和法医学参数。种群遗传关系通过Nei遗传距离计算,并使用各种生物统计学方法进行可视化。结果:共检测到264个等位基因,等位频率范围为0.0010 ~ 0.5104。23个STR位点的组合鉴别力(CDP)和组合父权概率(CPE)分别为0.999999999999999999999999999999999999999910422和0.9999999999979710422。贵州土家族与湖北土家族、贵州仡佬族、贵州苗族的亲缘关系较近。结论:利用23str系统首次获得了贵州土家的群体遗传资料,证明了其在法医学上的应用价值。综合种群比较表明,在地理、种族和语言相关的种群之间存在明显的遗传亲和模式。
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Genetic diversity of 23 STR loci of the Guizhou Tujia ethnic minority and the phylogenetic relationships with 22 other populations.

Background: Short tandem repeats (STR) are highly polymorphic DNA markers utilised in forensic personal identification and human population genetic research. Guizhou Tujia is one of the ancient minority groups in southwest China, however, the population has not been studied using the highly discriminating 23 STR Huaxia Platinum Kit.

Aim: To obtain genetic data from 23 autosomal STRs in Guizhou Tujia and examine the population's relationship with others.

Subjects and methods: A total of 480 individuals from the Guizhou Tujia population were analysed using 23 STR loci of Huaxia Platinum Kit. Allele frequencies and forensic parameters were estimated. Population genetic relationships were calculated by Nei's genetic distances and visualised using a variety of biostatistical methods.

Results: A total of 264 alleles were found, with allelic frequencies ranging from 0.0010 to 0.5104. The combined discrimination power (CDP) and the combined probability of paternity (CPE) of 23 STR loci were 0.9999999999999999999999999996 and 0.999999999710422, respectively. Guizhou Tujia showed closer genetic relationships with Hubei Tujia, Guizhou Gelao, and Guizhou Miao than with other populations.

Conclusion: We first obtained the population genetic data of Guizhou Tujia using the 23 STR system and demonstrated its value in forensic applications. Comprehensive population comparisons showed an evident genetic affinity pattern between populations that are geographically, ethnically and linguistically related.

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来源期刊
Annals of Human Biology
Annals of Human Biology 生物-公共卫生、环境卫生与职业卫生
CiteScore
3.40
自引率
5.90%
发文量
46
审稿时长
1 months
期刊介绍: Annals of Human Biology is an international, peer-reviewed journal published six times a year in electronic format. The journal reports investigations on the nature, development and causes of human variation, embracing the disciplines of human growth and development, human genetics, physical and biological anthropology, demography, environmental physiology, ecology, epidemiology and global health and ageing research.
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