Nora Beatriz Molina , Sebastián Oderiz , Marisa Ana López , Juan Ángel Basualdo , Mónica Delfina Sparo
{"title":"阿根廷布宜诺斯艾利斯两家医院门诊腹泻患儿中致泻性大肠杆菌的分子特征。","authors":"Nora Beatriz Molina , Sebastián Oderiz , Marisa Ana López , Juan Ángel Basualdo , Mónica Delfina Sparo","doi":"10.1016/j.ram.2023.06.002","DOIUrl":null,"url":null,"abstract":"<div><p>Diarrheagenic <em>Escherichia coli</em> comprises a heterogeneous group of pathotypes or pathogenic variants that share phenotypic characteristics with marked differences in virulence genes, colonization sites, pathogenesis, clinical presentation, and epidemiology of infection. The most studied pathotypes are Shiga toxin-producing <em>E.</em> <em>coli</em> (STEC), enterotoxigenic <em>E.</em> <em>coli</em> (ETEC), enteropathogenic <em>E.</em> <em>coli</em> (EPEC), enteroaggregative <em>E.</em> <em>coli</em> (EAEC), and enteroinvasive <em>E.</em> <em>coli</em> (EIEC). The objective of the study was to characterize the isolates of diarrheagenic <em>E.</em> <em>coli</em> from an outpatient pediatric population with diarrhea attended in two public hospitals from Buenos Aires, Argentina. Diarrheagenic <em>E.</em> <em>coli</em> pathotypes were investigated by amplifying characteristic virulence gene fragments: intimin (<em>eae</em>), heat-labile toxin (<em>lt</em>), heat-stable toxins (<em>stp</em>, <em>sth</em>), invasion plasmid antigen H (<em>ipaH</em>), transcriptional activator R (<em>aggR</em>) and Shiga toxins (<em>stx1</em>, <em>stx2</em>). Molecular subtyping of isolates was performed using PFGE (XbaI). Diarrheagenic <em>E.</em> <em>coli</em> was detected in 14% (84/601) of cases. The EAEC pathotype was prevalent, while ETEC, STEC, EPEC and EIEC were found in a lower proportion. EAEC isolates exhibited a high degree of genetic diversity. All pathotypes were found in children under 5<!--> <!-->years of age, while only EAEC, EIEC and ETEC were detected in the older population. Future studies that include the characterization of isolates from a greater number of genes and populations from other geographical areas will be necessary to determine the relevance of diarrheagenic <em>E.</em> <em>coli</em> in Argentina.</p></div>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0325754123000536/pdfft?md5=78f54a484a5c420995c5c6ecfb040477&pid=1-s2.0-S0325754123000536-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Caracterización molecular de Escherichia coli diarreogénica proveniente de población pediátrica ambulatoria con diarrea, atendida en dos hospitales de Buenos Aires, Argentina\",\"authors\":\"Nora Beatriz Molina , Sebastián Oderiz , Marisa Ana López , Juan Ángel Basualdo , Mónica Delfina Sparo\",\"doi\":\"10.1016/j.ram.2023.06.002\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Diarrheagenic <em>Escherichia coli</em> comprises a heterogeneous group of pathotypes or pathogenic variants that share phenotypic characteristics with marked differences in virulence genes, colonization sites, pathogenesis, clinical presentation, and epidemiology of infection. The most studied pathotypes are Shiga toxin-producing <em>E.</em> <em>coli</em> (STEC), enterotoxigenic <em>E.</em> <em>coli</em> (ETEC), enteropathogenic <em>E.</em> <em>coli</em> (EPEC), enteroaggregative <em>E.</em> <em>coli</em> (EAEC), and enteroinvasive <em>E.</em> <em>coli</em> (EIEC). The objective of the study was to characterize the isolates of diarrheagenic <em>E.</em> <em>coli</em> from an outpatient pediatric population with diarrhea attended in two public hospitals from Buenos Aires, Argentina. Diarrheagenic <em>E.</em> <em>coli</em> pathotypes were investigated by amplifying characteristic virulence gene fragments: intimin (<em>eae</em>), heat-labile toxin (<em>lt</em>), heat-stable toxins (<em>stp</em>, <em>sth</em>), invasion plasmid antigen H (<em>ipaH</em>), transcriptional activator R (<em>aggR</em>) and Shiga toxins (<em>stx1</em>, <em>stx2</em>). Molecular subtyping of isolates was performed using PFGE (XbaI). Diarrheagenic <em>E.</em> <em>coli</em> was detected in 14% (84/601) of cases. The EAEC pathotype was prevalent, while ETEC, STEC, EPEC and EIEC were found in a lower proportion. EAEC isolates exhibited a high degree of genetic diversity. All pathotypes were found in children under 5<!--> <!-->years of age, while only EAEC, EIEC and ETEC were detected in the older population. Future studies that include the characterization of isolates from a greater number of genes and populations from other geographical areas will be necessary to determine the relevance of diarrheagenic <em>E.</em> <em>coli</em> in Argentina.</p></div>\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2024-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0325754123000536/pdfft?md5=78f54a484a5c420995c5c6ecfb040477&pid=1-s2.0-S0325754123000536-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0325754123000536\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0325754123000536","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Caracterización molecular de Escherichia coli diarreogénica proveniente de población pediátrica ambulatoria con diarrea, atendida en dos hospitales de Buenos Aires, Argentina
Diarrheagenic Escherichia coli comprises a heterogeneous group of pathotypes or pathogenic variants that share phenotypic characteristics with marked differences in virulence genes, colonization sites, pathogenesis, clinical presentation, and epidemiology of infection. The most studied pathotypes are Shiga toxin-producing E.coli (STEC), enterotoxigenic E.coli (ETEC), enteropathogenic E.coli (EPEC), enteroaggregative E.coli (EAEC), and enteroinvasive E.coli (EIEC). The objective of the study was to characterize the isolates of diarrheagenic E.coli from an outpatient pediatric population with diarrhea attended in two public hospitals from Buenos Aires, Argentina. Diarrheagenic E.coli pathotypes were investigated by amplifying characteristic virulence gene fragments: intimin (eae), heat-labile toxin (lt), heat-stable toxins (stp, sth), invasion plasmid antigen H (ipaH), transcriptional activator R (aggR) and Shiga toxins (stx1, stx2). Molecular subtyping of isolates was performed using PFGE (XbaI). Diarrheagenic E.coli was detected in 14% (84/601) of cases. The EAEC pathotype was prevalent, while ETEC, STEC, EPEC and EIEC were found in a lower proportion. EAEC isolates exhibited a high degree of genetic diversity. All pathotypes were found in children under 5 years of age, while only EAEC, EIEC and ETEC were detected in the older population. Future studies that include the characterization of isolates from a greater number of genes and populations from other geographical areas will be necessary to determine the relevance of diarrheagenic E.coli in Argentina.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.