Breast Cancer Therapeutics and Hippo Signaling Pathway: Novel MicroRNA-Gene-Protein Interaction Networks.

IF 1.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Omics A Journal of Integrative Biology Pub Date : 2023-06-01 DOI:10.1089/omi.2023.0047
Shradheya R R Gupta, Garima Nagar, Pooja Mittal, Shweta Rana, Harpreet Singh, Rajeev Singh, Archana Singh, Indrakant K Singh
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引用次数: 1

Abstract

The Hippo signaling pathway is a master regulator of development, cell proliferation, and apoptosis in particular, and it plays an important role in tissue regeneration, controlling organ size, and cancer suppression. Dysregulation of the Hippo signaling pathway has been implicated in breast cancer, a highly prevalent cancer affecting 1 out of every 15 women worldwide. While the Hippo signaling pathway inhibitors are available, they are suboptimal, for example, due to chemoresistance, mutation, and signal leakage. Inadequate knowledge about the Hippo pathway connections and their regulators limits our ability to uncover novel molecular targets for drug development. We report here novel microRNA (miRNA)-gene and protein-protein interaction networks in the Hippo signaling pathway. We employed the GSE miRNA dataset for the present study. The GSE57897 dataset was normalized and searched for differentially expressed miRNAs, and their targets were searched using the miRWalk2.0 tool. From the upregulated miRNAs, we observed that the hsa-miR-205-5p forms the biggest cluster and targets four genes involved in the Hippo signaling pathway. Interestingly, we found a novel connection between two Hippo signaling pathway proteins, angiomotin (AMOT) and mothers against decapentaplegic homolog 4 (SMAD4). From the downregulated miRNAs, hsa-miR-16-5p, hsa-miR-7g-5p, hsa-miR-141-3p, hsa-miR-103a-3p, hsa-miR-21-5p, and hsa-miR-200c-3p, target genes were present in the pathway. We found that PTEN, EP300, and BTRC were important cancer-inhibiting proteins, form hubs, and their genes interact with downregulating miRNAs. We suggest that targeting proteins from these newly unraveled networks in the Hippo signaling pathway and further research on the interaction of hub-forming cancer-inhibiting proteins can open up new avenues for next-generation breast cancer therapeutics.

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乳腺癌治疗和Hippo信号通路:新的microrna -基因-蛋白相互作用网络。
Hippo信号通路是发育、细胞增殖和细胞凋亡的主要调控因子,在组织再生、控制器官大小和肿瘤抑制等方面发挥着重要作用。Hippo信号通路的失调与乳腺癌有关,乳腺癌是一种非常普遍的癌症,全世界每15名妇女中就有1名受到影响。虽然Hippo信号通路抑制剂是可用的,但它们不是最佳的,例如,由于化学耐药,突变和信号泄漏。对Hippo通路连接及其调控因子的不充分了解限制了我们发现药物开发的新分子靶点的能力。我们在这里报告了Hippo信号通路中新的microRNA (miRNA)-基因和蛋白-蛋白相互作用网络。我们在本研究中使用了GSE miRNA数据集。将GSE57897数据集归一化并搜索差异表达的mirna,并使用miRWalk2.0工具搜索其靶标。从上调的mirna中,我们观察到hsa-miR-205-5p形成了最大的簇,并靶向Hippo信号通路中涉及的四个基因。有趣的是,我们发现了两个河马信号通路蛋白,血管运动素(AMOT)和母亲抗十足瘫痪同源物4 (SMAD4)之间的新联系。从下调的mirna, hsa-miR-16-5p, hsa-miR-7g-5p, hsa-miR-141-3p, hsa-miR-103a-3p, hsa-miR-21-5p和hsa-miR-200c-3p中,靶基因存在于该途径中。我们发现PTEN, EP300和BTRC是重要的癌症抑制蛋白,形成枢纽,它们的基因与下调mirna相互作用。我们认为,针对Hippo信号通路中这些新发现的网络中的蛋白质,并进一步研究中心形成癌症抑制蛋白的相互作用,可以为下一代乳腺癌治疗开辟新的途径。
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来源期刊
Omics A Journal of Integrative Biology
Omics A Journal of Integrative Biology 生物-生物工程与应用微生物
CiteScore
6.00
自引率
12.10%
发文量
62
审稿时长
3 months
期刊介绍: OMICS: A Journal of Integrative Biology is the only peer-reviewed journal covering all trans-disciplinary OMICs-related areas, including data standards and sharing; applications for personalized medicine and public health practice; and social, legal, and ethics analysis. The Journal integrates global high-throughput and systems approaches to 21st century science from “cell to society” – seen from a post-genomics perspective.
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