Size and site specific transcriptomic responses of blue mussel (Mytilus edulis) to acute hypoxia

IF 1.3 4区 生物学 Q4 GENETICS & HEREDITY Marine genomics Pub Date : 2023-10-01 DOI:10.1016/j.margen.2023.101060
Stephanie Hall , Denise Méthé , Sarah Stewart-Clark , Fraser Clark
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Abstract

The Prince Edward Island (PEI) mussel aquaculture industry is being challenged by climate change induced environmental stressors including hypoxic/anoxic episodes, that can impact mussel health and survival. Physiological responses of mussels to hypoxia/anoxia have been studied; however, less is known about how transcriptomic response leads to physiology. The present study examined the transcriptomic response of acute (4 h) hypoxia in blue mussels (Mytilus edulis) from two sites and size classes in PEI, Canada. Overall, major changes in whole-mussel transcriptomics associated with metabolism, cellular organelles/processes and environmental sensing were observed in the first hours of hypoxia exposure. Differences in differentially expressed transcripts were observed between each site and size, indicating that responses to acute hypoxia exposure are highly complex. A size related pattern was observed, with seed size mussels having differential expression of transcripts associated with development, muscle function, and byssal attachment compared to the adults. Adult mussels had higher HSP 90 expression, while HSPs were predominately under-expressed in seed mussels. Seed mussels had significant under-expression of several classes of byssal thread attachment transcripts, indicating a decline in the production of byssal thread or detachment, both which have negative consequences for mussel aquaculture.

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蓝贻贝(Mytilus edulis)对急性缺氧的大小和位点特异性转录组反应
爱德华王子岛(PEI)贻贝养殖业正受到气候变化引起的环境压力的挑战,包括缺氧/缺氧事件,这可能影响贻贝的健康和生存。研究了贻贝对低氧/缺氧的生理反应;然而,对转录组反应如何导致生理的了解较少。本研究在加拿大PEI的两个地点和大小类别的蓝贻贝(Mytilus edulis)中检测了急性(4小时)缺氧的转录组反应。总体而言,在缺氧暴露的最初几个小时内,观察到与代谢、细胞器/过程和环境感知相关的全贻贝转录组学的主要变化。不同部位和大小的差异表达转录物被观察到,表明急性缺氧暴露的反应是高度复杂的。我们观察到一种与大小相关的模式,与成年贻贝相比,种子大小的贻贝具有与发育、肌肉功能和基底附着相关的转录本的差异表达。成体贻贝的HSP - 90表达量较高,而种子贻贝的HSP - 90表达量偏低。种子贻贝有几类粗丝线附着转录本显著低表达,表明粗丝线产量下降或脱落,这两种情况对贻贝养殖都有负面影响。
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来源期刊
Marine genomics
Marine genomics 生物-遗传学
CiteScore
3.60
自引率
5.30%
发文量
50
审稿时长
29 days
期刊介绍: The journal publishes papers on all functional and evolutionary aspects of genes, chromatin, chromosomes and (meta)genomes of marine (and freshwater) organisms. It deals with new genome-enabled insights into the broader framework of environmental science. Topics within the scope of this journal include: • Population genomics and ecology • Evolutionary and developmental genomics • Comparative genomics • Metagenomics • Environmental genomics • Systems biology More specific topics include: geographic and phylogenomic characterization of aquatic organisms, metabolic capacities and pathways of organisms and communities, biogeochemical cycles, genomics and integrative approaches applied to microbial ecology including (meta)transcriptomics and (meta)proteomics, tracking of infectious diseases, environmental stress, global climate change and ecosystem modelling.
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