Overexpressed Histocompatibility Minor 13 was Associated with Liver Hepatocellular Carcinoma Progression and Prognosis.

IF 1.4 4区 生物学 Q4 GENETICS & HEREDITY Genetics research Pub Date : 2022-01-01 DOI:10.1155/2022/7067743
Rui-Qing Zong, Hong-Yan Zhang, Xiao-Ying Li, Yi-Ran Li, Ying Chen
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Abstract

Among primary liver carcinoma cases, the proportion of liver hepatocellular carcinoma (LIHC) cases is 75%-85%. Current treatments for LIHC include chemotherapy, surgical excision, and liver transplantation, which are effective for early LIHC treatment. Nevertheless, the early symptoms of liver carcinoma are atypical, so a large proportion of LIHC patients are diagnosed at an advanced stage. Histocompatibility minor 13 (HM13), located in the endoplasmic reticulum, is responsible for catalysing the hydrolysis of some signal peptides after cleavage from the precursor protein. Here, we studied the role of HM13 in LIHC development through bioinformatics analysis. Database analysis showed that HM13 was of great significance for LIHC tumorigenesis. Compared to normal liver tissues, HM13 expression was increased to a greater extent in LIHC tissues. After analysis of Kaplan‒Meier plotter and Gene Expression Profiling Interactive Analysis (GEPIA) datasets, we discovered that highly expressed HM13 exhibited an association with shorter overall survival (OS), disease-free survival (DFS), and disease-specific survival (DSS). We conducted Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses to analyse HM13-related genes, and the data indicated that these genes obviously participated in rRNA processing, ribosome biogenesis, spliceosome, Huntington's disease, and ATP-dependent helicase activity. The Cell Counting Kit-8 (CCK-8) assay and Transwell assay showed that reducing HM13 expression hindered LIHC cell proliferation, migration, and invasion. In conclusion, these findings indicate that HM13 is a biomarker and is related to the poor prognosis of LIHC. Our results are conducive to discovering new targets for LIHC treatment.

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组织相容性Minor 13过表达与肝细胞癌进展及预后相关。
原发性肝癌病例中,肝细胞癌(LIHC)病例所占比例为75%-85%。目前LIHC的治疗方法包括化疗、手术切除和肝移植,这些方法对早期LIHC治疗有效。然而,肝癌的早期症状是不典型的,因此很大一部分LIHC患者在晚期才被诊断出来。小组织相容性13 (HM13)位于内质网,负责催化前体蛋白裂解后的一些信号肽的水解。在此,我们通过生物信息学分析研究了HM13在LIHC发展中的作用。数据库分析表明,HM13在LIHC肿瘤发生中具有重要意义。与正常肝组织相比,在LIHC组织中,HM13的表达增加幅度更大。在Kaplan-Meier绘图仪和基因表达谱交互分析(GEPIA)数据集分析后,我们发现高表达的HM13与较短的总生存期(OS)、无病生存期(DFS)和疾病特异性生存期(DSS)相关。我们通过基因本体(Gene Ontology, GO)和京都基因基因组百科全书(Kyoto Encyclopedia of Genes and Genomes, KEGG)对hm13相关基因进行了分析,数据显示这些基因明显参与了rRNA加工、核糖体生物发生、剪接体、亨廷顿病和atp依赖性解旋酶活性。细胞计数试剂盒-8 (CCK-8)和Transwell实验显示,降低HM13表达可抑制LIHC细胞的增殖、迁移和侵袭。综上所述,这些发现表明HM13是一种生物标志物,与LIHC的不良预后有关。我们的结果有助于发现LIHC治疗的新靶点。
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来源期刊
Genetics research
Genetics research 生物-遗传学
自引率
6.70%
发文量
74
审稿时长
>12 weeks
期刊介绍: Genetics Research is a key forum for original research on all aspects of human and animal genetics, reporting key findings on genomes, genes, mutations and molecular interactions, extending out to developmental, evolutionary, and population genetics as well as ethical, legal and social aspects. Our aim is to lead to a better understanding of genetic processes in health and disease. The journal focuses on the use of new technologies, such as next generation sequencing together with bioinformatics analysis, to produce increasingly detailed views of how genes function in tissues and how these genes perform, individually or collectively, in normal development and disease aetiology. The journal publishes original work, review articles, short papers, computational studies, and novel methods and techniques in research covering humans and well-established genetic organisms. Key subject areas include medical genetics, genomics, human evolutionary and population genetics, bioinformatics, genetics of complex traits, molecular and developmental genetics, Evo-Devo, quantitative and statistical genetics, behavioural genetics and environmental genetics. The breadth and quality of research make the journal an invaluable resource for medical geneticists, molecular biologists, bioinformaticians and researchers involved in genetic basis of diseases, evolutionary and developmental studies.
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