Construction of a prognostic model for lung adenocarcinoma based on heat shock protein-related genes and immune analysis.

IF 3.3 3区 生物学 Q3 CELL BIOLOGY Cell Stress & Chaperones Pub Date : 2023-11-01 Epub Date: 2023-09-11 DOI:10.1007/s12192-023-01374-5
Wangyan Zhou, Wei Zeng, Dayang Zheng, Xu Yang, Yongcheng Qing, Chunxiang Zhou, Xiang Liu
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Abstract

Lung adenocarcinoma (LUAD) represents a prevalent form of cancer, with low early diagnosis rates and high mortality rates, posing a global health challenge. Heat shock proteins (HSPs) assume a crucial role within the tumor immune microenvironment (TME) of LUAD. Here, a collection of 97 HSP-related genes (HSPGs) was assembled based on prior literature reports, of which 36 HSPGs were differentially expressed in LUAD. In The Cancer Genome Atlas (TCGA) cohort, we constructed a prognostic model for risk stratification and prognosis prediction by integrating 13 HSPGs. In addition, the prognostic significance and predictive efficacy of the HSP-related riskscore were examined and validated in the Gene Expression Omnibus (GEO) cohort. To facilitate the clinical use of this riskscore, we also established a nomogram scale by verifying its effectiveness through different methods. In light of these outcomes, we concluded a significant correlation between HSPs and TME in LUAD, and the riskscore can be a reliable prognostic indicator. Furthermore, this study evaluated the differences in immunophenoscore, tumor immune dysfunction and exclusion score, and sensitivity to several common chemotherapy drugs among LUAD individuals in different risk groups, which may aid in clinical decision-making for immune therapy and chemotherapy in LUAD individuals.

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基于热休克蛋白相关基因和免疫分析构建肺腺癌预后模型
肺腺癌(LUAD)是一种普遍存在的癌症,其早期诊断率低、死亡率高,对全球健康构成了挑战。热休克蛋白(HSP)在肺腺癌的肿瘤免疫微环境(TME)中发挥着至关重要的作用。在此,我们根据先前的文献报道收集了97个HSP相关基因(HSPGs),其中36个HSPGs在LUAD中有差异表达。在癌症基因组图谱(TCGA)队列中,我们整合了13个HSPGs,构建了一个用于风险分层和预后预测的预后模型。此外,我们还在基因表达总库(GEO)队列中检验并验证了HSP相关风险评分的预后意义和预测效果。为了便于临床使用该风险评分,我们还通过不同的方法验证了其有效性,从而建立了一个提名图量表。根据这些结果,我们得出结论:在 LUAD 中,HSP 与 TME 之间存在显著相关性,风险评分可作为可靠的预后指标。此外,本研究还评估了不同风险组LUAD患者的免疫表观评分、肿瘤免疫功能障碍和排异评分以及对几种常见化疗药物敏感性的差异,这可能有助于LUAD患者免疫治疗和化疗的临床决策。
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来源期刊
Cell Stress & Chaperones
Cell Stress & Chaperones 生物-细胞生物学
CiteScore
7.60
自引率
2.60%
发文量
59
审稿时长
6-12 weeks
期刊介绍: Cell Stress and Chaperones is an integrative journal that bridges the gap between laboratory model systems and natural populations. The journal captures the eclectic spirit of the cellular stress response field in a single, concentrated source of current information. Major emphasis is placed on the effects of climate change on individual species in the natural environment and their capacity to adapt. This emphasis expands our focus on stress biology and medicine by linking climate change effects to research on cellular stress responses of animals, micro-organisms and plants.
期刊最新文献
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