Inferring the temporal evolution of synaptic weights from dynamic functional connectivity.

Q1 Computer Science Brain Informatics Pub Date : 2022-12-08 DOI:10.1186/s40708-022-00178-0
Marco Celotto, Stefan Lemke, Stefano Panzeri
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Abstract

How to capture the temporal evolution of synaptic weights from measures of dynamic functional connectivity between the activity of different simultaneously recorded neurons is an important and open problem in systems neuroscience. Here, we report methodological progress to address this issue. We first simulated recurrent neural network models of spiking neurons with spike timing-dependent plasticity mechanisms that generate time-varying synaptic and functional coupling. We then used these simulations to test analytical approaches that infer fixed and time-varying properties of synaptic connectivity from directed functional connectivity measures, such as cross-covariance and transfer entropy. We found that, while both cross-covariance and transfer entropy provide robust estimates of which synapses are present in the network and their communication delays, dynamic functional connectivity measured via cross-covariance better captures the evolution of synaptic weights over time. We also established how measures of information transmission delays from static functional connectivity computed over long recording periods (i.e., several hours) can improve shorter time-scale estimates of the temporal evolution of synaptic weights from dynamic functional connectivity. These results provide useful information about how to accurately estimate the temporal variation of synaptic strength from spiking activity measures.

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从动态功能连接中推断突触权重的时间演化
如何通过测量同时记录的不同神经元活动之间的动态功能连通性来捕捉突触权重的时间演化是系统神经科学中一个重要而又有待解决的问题。在此,我们报告了解决这一问题的方法学进展。我们首先模拟了尖峰神经元的递归神经网络模型,该模型具有依赖于尖峰计时的可塑性机制,可产生时变的突触和功能耦合。然后,我们利用这些模拟测试了从定向功能连接度量(如交叉协方差和转移熵)推断突触连接的固定和时变特性的分析方法。我们发现,虽然交叉协方差和传递熵都能可靠地估计网络中存在哪些突触及其通信延迟,但通过交叉协方差测量的动态功能连通性能更好地捕捉突触权重随时间的演变。我们还确定了通过长记录周期(即数小时)计算的静态功能连通性得出的信息传输延迟测量值如何改善动态功能连通性得出的突触权重随时间演变的较短时间尺度估计值。这些结果为如何从尖峰活动测量中准确估计突触强度的时间变化提供了有用的信息。
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来源期刊
Brain Informatics
Brain Informatics Computer Science-Computer Science Applications
CiteScore
9.50
自引率
0.00%
发文量
27
审稿时长
13 weeks
期刊介绍: Brain Informatics is an international, peer-reviewed, interdisciplinary open-access journal published under the brand SpringerOpen, which provides a unique platform for researchers and practitioners to disseminate original research on computational and informatics technologies related to brain. This journal addresses the computational, cognitive, physiological, biological, physical, ecological and social perspectives of brain informatics. It also welcomes emerging information technologies and advanced neuro-imaging technologies, such as big data analytics and interactive knowledge discovery related to various large-scale brain studies and their applications. This journal will publish high-quality original research papers, brief reports and critical reviews in all theoretical, technological, clinical and interdisciplinary studies that make up the field of brain informatics and its applications in brain-machine intelligence, brain-inspired intelligent systems, mental health and brain disorders, etc. The scope of papers includes the following five tracks: Track 1: Cognitive and Computational Foundations of Brain Science Track 2: Human Information Processing Systems Track 3: Brain Big Data Analytics, Curation and Management Track 4: Informatics Paradigms for Brain and Mental Health Research Track 5: Brain-Machine Intelligence and Brain-Inspired Computing
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