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Multimodal fusion and explainability of artificial intelligence models in Alzheimer's Disease detection. 人工智能模型在阿尔茨海默病检测中的多模态融合与可解释性。
IF 4.5 Q1 Computer Science Pub Date : 2026-02-02 DOI: 10.1186/s40708-025-00291-w
Vimbi Viswan, Noushath Shaffi, E Malathy, G Chemmalar Selvi, B R Kavitha, Abdelhamid Abdesselam, Shuqiang Wang, Ponnuthurai N Suganthan, Ibrahim Al Shezawi, Mufti Mahmud

The integration of multimodal data has emerged as a powerful strategy for enhancing the accuracy and interpretability of artificial intelligence (AI) models in the diagnosis and prognosis of Alzheimer's Disease (AD). This systematic review presents a comprehensive synthesis of recent advances in AI-driven multimodal fusion approaches for AD prediction. A detailed examination of widely used datasets-including their modalities, preprocessing pipelines, and accessibility-is provided to aid reproducibility and methodological transparency. We analyze and categorize the various data harmonization and preprocessing techniques employed across neuroimaging (e.g., fMRI, sMRI, PET), electrophysiological (EEG), and genomic modalities, highlighting domain-specific practices and challenges. Furthermore, fusion strategies are classified into data-level, feature-level, decision-level, and temporal (early, intermediate, and late) paradigms, offering insights into their implementation and diagnostic impact. The review also investigates the adoption of explainable AI (XAI) techniques across studies and identifies a significant underrepresentation of works that simultaneously emphasize multimodality, explainability, and methodological rigor. By adhering to both PRISMA and Kitchenham's guidelines, this review ensures transparency and replicability in evidence synthesis. Compared to existing reviews, our work uniquely focuses on the intersection of multimodal integration and explainability within a systematically validated framework. The review concludes with recommendations for future research aimed at developing robust, interpretable, and clinically relevant AI models for AD.

多模态数据的整合已成为提高人工智能(AI)模型在阿尔茨海默病(AD)诊断和预后中的准确性和可解释性的有力策略。这篇系统综述全面综合了人工智能驱动的用于AD预测的多模态融合方法的最新进展。提供了广泛使用的数据集的详细检查-包括其模式,预处理管道和可访问性-以帮助再现性和方法透明度。我们分析和分类了神经成像(例如,fMRI, sMRI, PET),电生理(EEG)和基因组模式)中使用的各种数据协调和预处理技术,突出了特定领域的实践和挑战。此外,融合策略被分类为数据级、特征级、决策级和时间(早期、中期和后期)范式,提供了对其实现和诊断影响的见解。该综述还调查了在研究中采用可解释人工智能(XAI)技术的情况,并确定了同时强调多模态、可解释性和方法严谨性的作品的显著代表性不足。通过遵守PRISMA和Kitchenham的指导方针,该审查确保了证据合成的透明度和可复制性。与现有的评论相比,我们的工作独特地集中在系统验证框架内的多模式集成和可解释性的交叉点上。该综述总结了对未来研究的建议,旨在开发稳健、可解释和临床相关的阿尔茨海默病人工智能模型。
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引用次数: 0
Modeling 3D mesoscaled neuronal complexity through learning-based dynamic morphometric convolution. 通过基于学习的动态形态计量卷积建模三维中尺度神经元复杂性。
IF 4.5 Q1 Computer Science Pub Date : 2026-01-29 DOI: 10.1186/s40708-025-00288-5
Yik San Cheng, Runkai Zhao, Heng Wang, Hanchuan Peng, Wojciech Chrzanowski, Weidong Cai
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引用次数: 0
Explainable artificial intelligence in air traffic control: effects of expertise on workload, acceptance, and usage intentions. 空中交通管制中可解释的人工智能:专业知识对工作量、接受度和使用意图的影响。
IF 4.5 Q1 Computer Science Pub Date : 2026-01-24 DOI: 10.1186/s40708-025-00287-6
Giulia Cartocci, Alexandre Veyrié, Nicola Cavagnetto, Christophe Hurter, Augustin Degas, Ana Ferreira, Mobyen Uddin Ahmed, Shahina Begum, Shaibal Barua, Bianca Maria Serena Inguscio, Vincenzo Ronca, Gianluca Borghini, Gianluca Di Flumeri, Fabio Babiloni, Pietro Aricò

Explainability is crucial for establishing user trust in Artificial Intelligence (AI), particularly within safety-critical domains such as Air Traffic Management (ATM) and Air Traffic Control (ATC). This study empirically investigates the effects of Explainable AI (XAI), specifically HeatMap-based visual explanations, on cognitive workload, user acceptance, and intention to use AI-driven decision-support systems among Air Traffic Control Officers (ATCOs). Despite significant theoretical advancements in the broader XAI domain, empirical evidence addressing the specific impact of visual explanations on human-AI interactions in safety-critical environments like ATC remains limited. To address these critical gaps, an experimental comparison was conducted between explainable (HeatMap) and non-explainable (BlackBox) AI conditions, involving two user groups: expert and student ATCOs. Both objective neurophysiological measures (Electroencephalography) and subjective questionnaires were employed to capture comprehensive user responses. Key findings revealed that the presence of visual explanations significantly reduced cognitive workload and enhanced users' willingness to adopt the AI system, regardless of participants' level of expertise. However, explicit perceptions of AI's impact on work performance were predominantly influenced by expertise, with less experienced controllers reporting a greater perceived impact than their expert counterparts. By combining objective neurometrics with subjective user assessments, this research advances methodological rigor in evaluating human-AI interactions and highlights the importance of tailored, user-centric explanations. These findings directly contribute to practical guidelines for designing cognitively compatible and trustworthy AI tools in ATC, providing nuanced insights for targeted training and deployment strategies based on user expertise.

可解释性对于建立用户对人工智能(AI)的信任至关重要,特别是在空中交通管理(ATM)和空中交通管制(ATC)等安全关键领域。本研究实证调查了可解释的人工智能(XAI),特别是基于热图的视觉解释,对认知工作量、用户接受度和空中交通管制人员(atco)使用人工智能驱动的决策支持系统的意图的影响。尽管在更广泛的XAI领域取得了重大的理论进展,但在ATC等安全关键环境中,视觉解释对人类- ai交互的具体影响的经验证据仍然有限。为了解决这些关键差距,在可解释(热图)和不可解释(黑匣子)人工智能条件之间进行了实验比较,涉及两个用户组:专家和学生atco。采用客观神经生理测量(脑电图)和主观问卷调查来获取全面的用户反应。主要研究结果显示,无论参与者的专业水平如何,视觉解释的存在显著减少了认知工作量,增强了用户采用人工智能系统的意愿。然而,人工智能对工作绩效影响的明确感知主要受到专业知识的影响,经验不足的控制员报告的感知影响比专家同行更大。通过将客观神经测量与主观用户评估相结合,本研究提高了评估人类与人工智能交互的方法严谨性,并强调了量身定制的、以用户为中心的解释的重要性。这些发现直接有助于在空中交通管制中设计认知兼容和值得信赖的人工智能工具的实用指南,为基于用户专业知识的有针对性的培训和部署策略提供细致的见解。
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引用次数: 0
Beyond the lab: real-world benchmarking of wearable EEGs for passive brain-computer interfaces. 实验室之外:用于被动脑机接口的可穿戴脑电图的真实基准测试。
IF 4.5 Q1 Computer Science Pub Date : 2025-12-28 DOI: 10.1186/s40708-025-00290-x
Ronca Vincenzo, Cecchetti Marianna, Capotorto Rossella, Di Flumeri Gianluca, Giorgi Andrea, Germano Daniele, Borghini Gianluca, Babiloni Fabio, Aricò Pietro

Purpose: Wearable EEG systems are increasingly used for brain-computer interface (BCI) applications beyond controlled laboratory environments. However, there is still limited evidence on their reliability in real-world cognitive monitoring, especially for deriving robust mental-state indicators. This study investigates the signal quality, computational stability, and neurometric consistency of two widely used consumer-grade EEG devices (Emotiv EPOC X and Muse S) compared to a validated research-grade system (Mindtooth Touch) during naturalistic tasks relevant to passive BCIs and brain-machine intelligence.

Method: Twenty-four participants completed a multimodal protocol including video observation, multitasking under varying cognitive loads, and a simulated driving task. Each participant used all three EEG systems in a counterbalanced order to avoid any bias induced by the order. Signal quality was assessed through artefact analysis and Power Spectral Density (PSD) stability. Neurometrics, i.e., metrics related to specific mental and emotional states that can be extracted from EEG signal processing (workload, attention, vigilance, and approach-withdrawal) were extracted and compared across devices, conditions, and subjective reports of effort and comfort.

Finding: The research grade system demonstrated higher signal stability, fewer artefacts, and more consistent neurometric responses to cognitive variations, with high significant correlation with subjective measures. Post-processing improved data continuity in consumer devices, but neurometrics remained less sensitive to task demands and less aligned with subjective ratings. Each device reflected different trade-offs between data quality, usability, and cost.

Conclusion: Research-grade systems remain more reliable for passive BCI applications requiring high-resolution cognitive state monitoring. Nevertheless, consumer-grade headsets may still be appropriate for exploratory studies or non-critical applications. This work highlights key trade-offs between signal quality, usability, and application goals, contributing to the broader integration of wearable neurotechnologies into brain-machine intelligence frameworks.

目的:可穿戴脑电图系统越来越多地用于受控实验室环境之外的脑机接口(BCI)应用。然而,它们在现实世界认知监测中的可靠性证据仍然有限,特别是在获得稳健的精神状态指标方面。本研究调查了两种广泛使用的消费级脑电图设备(Emotiv EPOC X和Muse S)与经过验证的研究级系统(Mindtooth Touch)在与被动脑机接口和脑机智能相关的自然任务中的信号质量、计算稳定性和神经测量一致性。方法:24名参与者完成了一项多模式协议,包括视频观察、不同认知负荷下的多任务处理和模拟驾驶任务。每个参与者以平衡的顺序使用所有三个EEG系统,以避免顺序引起的任何偏差。通过伪影分析和功率谱密度(PSD)稳定性评估信号质量。神经指标,即从脑电图信号处理中提取的与特定精神和情绪状态相关的指标(工作量、注意力、警惕性和接近退缩)被提取出来,并在设备、条件和主观报告的努力和舒适之间进行比较。发现:研究等级系统表现出更高的信号稳定性,更少的伪影,对认知变化的神经测量反应更一致,与主观测量具有高度显著的相关性。后处理提高了消费设备的数据连续性,但神经测量对任务需求的敏感度仍然较低,与主观评分的一致性也较差。每个设备都反映了数据质量、可用性和成本之间的不同权衡。结论:对于需要高分辨率认知状态监测的被动脑机接口应用,研究级系统仍然更可靠。然而,消费级耳机可能仍然适合探索性研究或非关键应用。这项工作强调了信号质量、可用性和应用目标之间的关键权衡,有助于将可穿戴神经技术更广泛地集成到脑机智能框架中。
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引用次数: 0
The independent prognostic value of brain diffusion tensor imaging in comatose patients after cardiac arrest. 脑弥散张量成像对心脏骤停后昏迷患者的独立预后价值。
IF 4.5 Q1 Computer Science Pub Date : 2025-12-28 DOI: 10.1186/s40708-025-00284-9
Xuejia Jia, Rui Shao, Yingying Li, Xiuqin Jia, Ziren Tang, Qi Yang

Background/objective: Predicting neurological outcomes in comatose cardiac arrest survivors remains challenging. Diffusion tensor imaging (DTI) offers potential as an objective biomarker of white matter injury, but its prognostic value needs further validation. We aimed to investigate the predictive value of DTI-derived metrics for six-month neurological outcomes in comatose cardiac arrest patients.

Methods: This prospective study enrolled 28 comatose cardiac arrest patients (mean age 54.36 ± 3.01 years; 71% male) and 28 age-/sex-matched healthy controls (HCs). All participants underwent 3T brain MRI (median 4 days post-arrest). DTI parameters (fractional anisotropy [FA], mean diffusivity [MD], axial diffusivity [AD], radial diffusivity [RD]) were analyzed using Tract-based spatial statistics (TBSS) and ROI approaches based on white matter atlas. Neurological outcome was assessed at six months using the modified Rankin Scale (good outcome: mRS 0-2; poor outcome: mRS 3-5). Statistical analyses included voxel-wise comparisons and ROC curve analysis for predictive performance.

Results: Compared to HCs, patients showed widespread reductions in FA, MD, AD, and RD (TFCE-corrected p < 0.05). Patients with poor outcomes (n = 18) exhibited significantly lower DTI metrics than those with good outcomes (n = 10) across most white matter tracts. The combination of whole-brain FA and RD demonstrated exceptional prognostic accuracy for good outcome (AUC = 0.984; 95% CI 0.925-1.000; sensitivity 92%, specificity 97.7%), significantly outperforming clinical variables and individual DTI parameters. ROI analysis identified specific tracts (e.g., right cingulum hippocampus, right uncinate fasciculus) with high predictive values. Ventricular fibrillation as initial rhythm was more frequent in the group with good outcomes.

Conclusions: DTI metrics, particularly the combination of FA and RD, provided outstanding early prediction of good six-month neurological outcomes after cardiac arrest, surpassing traditional biomarkers. These findings supported integrating DTI into multimodal prognostic models to guide clinical decisions and prevent premature withdrawal of life-sustaining therapy.

背景/目的:预测昏迷性心脏骤停幸存者的神经预后仍然具有挑战性。弥散张量成像(DTI)作为白质损伤的客观生物标志物具有潜力,但其预后价值有待进一步验证。我们的目的是研究dti衍生指标对昏迷心脏骤停患者6个月神经预后的预测价值。方法:本前瞻性研究纳入28例昏迷性心脏骤停患者(平均年龄54.36±3.01岁,71%为男性)和28例年龄/性别匹配的健康对照(hc)。所有参与者均接受3T脑MRI检查(中位停搏后4天)。DTI参数(分数各向异性[FA]、平均扩散系数[MD]、轴向扩散系数[AD]、径向扩散系数[RD])采用基于束的空间统计(TBSS)和基于白质图谱的ROI方法进行分析。6个月时使用改良Rankin量表评估神经系统预后(好结果:mRS 0-2;差结果:mRS 3-5)。统计分析包括预测性能的体素比较和ROC曲线分析。结果:与hc相比,患者FA、MD、AD和RD (tfce校正p)普遍降低。结论:DTI指标,特别是FA和RD的结合,提供了心脏骤停后6个月良好神经预后的杰出早期预测,超过了传统的生物标志物。这些发现支持将DTI纳入多模式预后模型,以指导临床决策并防止过早退出维持生命的治疗。
{"title":"The independent prognostic value of brain diffusion tensor imaging in comatose patients after cardiac arrest.","authors":"Xuejia Jia, Rui Shao, Yingying Li, Xiuqin Jia, Ziren Tang, Qi Yang","doi":"10.1186/s40708-025-00284-9","DOIUrl":"10.1186/s40708-025-00284-9","url":null,"abstract":"<p><strong>Background/objective: </strong>Predicting neurological outcomes in comatose cardiac arrest survivors remains challenging. Diffusion tensor imaging (DTI) offers potential as an objective biomarker of white matter injury, but its prognostic value needs further validation. We aimed to investigate the predictive value of DTI-derived metrics for six-month neurological outcomes in comatose cardiac arrest patients.</p><p><strong>Methods: </strong>This prospective study enrolled 28 comatose cardiac arrest patients (mean age 54.36 ± 3.01 years; 71% male) and 28 age-/sex-matched healthy controls (HCs). All participants underwent 3T brain MRI (median 4 days post-arrest). DTI parameters (fractional anisotropy [FA], mean diffusivity [MD], axial diffusivity [AD], radial diffusivity [RD]) were analyzed using Tract-based spatial statistics (TBSS) and ROI approaches based on white matter atlas. Neurological outcome was assessed at six months using the modified Rankin Scale (good outcome: mRS 0-2; poor outcome: mRS 3-5). Statistical analyses included voxel-wise comparisons and ROC curve analysis for predictive performance.</p><p><strong>Results: </strong>Compared to HCs, patients showed widespread reductions in FA, MD, AD, and RD (TFCE-corrected p < 0.05). Patients with poor outcomes (n = 18) exhibited significantly lower DTI metrics than those with good outcomes (n = 10) across most white matter tracts. The combination of whole-brain FA and RD demonstrated exceptional prognostic accuracy for good outcome (AUC = 0.984; 95% CI 0.925-1.000; sensitivity 92%, specificity 97.7%), significantly outperforming clinical variables and individual DTI parameters. ROI analysis identified specific tracts (e.g., right cingulum hippocampus, right uncinate fasciculus) with high predictive values. Ventricular fibrillation as initial rhythm was more frequent in the group with good outcomes.</p><p><strong>Conclusions: </strong>DTI metrics, particularly the combination of FA and RD, provided outstanding early prediction of good six-month neurological outcomes after cardiac arrest, surpassing traditional biomarkers. These findings supported integrating DTI into multimodal prognostic models to guide clinical decisions and prevent premature withdrawal of life-sustaining therapy.</p>","PeriodicalId":37465,"journal":{"name":"Brain Informatics","volume":"12 1","pages":"37"},"PeriodicalIF":4.5,"publicationDate":"2025-12-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12748314/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145851066","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Machine learning with multitype functional connectivity uncovers whole-brain network disruption in primary angle-closure glaucoma. 多类型功能连接的机器学习揭示了原发性闭角型青光眼的全脑网络破坏。
IF 4.5 Q1 Computer Science Pub Date : 2025-12-27 DOI: 10.1186/s40708-025-00289-4
Guangxiang Chen, Dekai Hu, Xin Huang, Zhijiang Wan

Primary angle-closure glaucoma (PACG), an irreversible blinding disease characterized by retinal ganglion cell damage and optic nerve atrophy, exerts significant effects on brain functional networks. Using resting-state functional magnetic resonance imaging (rs-fMRI) data from 34 PACG patients and 34 matched healthy controls (HCs), we extracted four types of connectivity features-voxel-wise static functional connectivity (FC), dynamic functional connectivity (dFC), effective connectivity (EC), and dynamic effective connectivity (dEC)-via the AAL90 (Automated Anatomical Labeling 90) atlas following preprocessing. Elastic net feature selection was applied independently to each connectivity type to retain the top 10% most discriminative features. We evaluated the classification performance of ten machine learning models using individual feature types as well as their combined features, with the FC-based logistic regression (LR) model achieving optimal diagnostic efficacy (accuracy = 0.92, AUC = 0.96). SHapley Additive exPlanations (SHAP) of the model identified 20 critical connections, revealing abnormal patterns at both the region of interest (ROI)-level and network-level within brain networks such as the visual network (VSN), dorsal attention network (DAN), and sensorimotor network (SMN). Statistical group comparisons validated reduced connectivity (e.g., VSN-SMN, VSN-DAN) and enhanced DAN-thalamus connectivity in patients, while voxel-wise analyses of key regions confirmed diminished connectivity to visual areas. The results provide insights into how machine learning can be effectively employed to detect PACG-specific brain network disruptions and highlight potential neuroimaging biomarkers.

原发性闭角型青光眼(Primary angle-closure glaucoma, PACG)是一种以视网膜神经节细胞损伤和视神经萎缩为特征的不可逆致盲疾病,对大脑功能网络有显著影响。利用来自34名PACG患者和34名匹配健康对照(hc)的静息状态功能磁共振成像(rs-fMRI)数据,我们通过AAL90(自动解剖标记90)图谱提取了四种类型的连接特征——体素方向的静态功能连接(FC)、动态功能连接(dFC)、有效连接(EC)和动态有效连接(dEC)。将弹性网络特征选择独立应用于每种连接类型,以保留前10%最具区别性的特征。我们使用单个特征类型及其组合特征评估了10个机器学习模型的分类性能,其中基于fc的逻辑回归(LR)模型获得了最佳的诊断效果(准确率= 0.92,AUC = 0.96)。该模型的SHapley加性解释(SHAP)确定了20个关键连接,揭示了视觉网络(VSN)、背侧注意网络(DAN)和感觉运动网络(SMN)等大脑网络中兴趣区域(ROI)水平和网络水平的异常模式。统计组比较证实了患者的连通性降低(例如,VSN-SMN, VSN-DAN)和dan -丘脑连通性增强,而关键区域的体素分析证实了与视觉区域的连通性降低。这些结果为如何有效地利用机器学习来检测pacg特异性脑网络中断和突出潜在的神经成像生物标志物提供了见解。
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引用次数: 0
Vision and convolutional transformers for Alzheimer's disease diagnosis: a systematic review of architectures, multimodal fusion and critical gaps. 阿尔茨海默病诊断的视觉和卷积变压器:体系结构、多模态融合和关键间隙的系统回顾。
IF 4.5 Q1 Computer Science Pub Date : 2025-12-17 DOI: 10.1186/s40708-025-00286-7
Ibrahem Afifi, Mostafa Elgendy, Mohamed Abdelfatah, Shaker El-Sappagh

Alzheimer's disease (AD), a significant public health challenge, requires accurate early diagnosis to improve patient outcomes. Vision Transformers (ViTs) and Convolutional Vision Transformers (CViTs) have emerged as powerful Deep Learning architectures for this task. Following PRISMA guidelines, this systematic review analyzes 68 studies selected from 564 publications (2021-2025) across five major databases: Scopus, Web of Science, ScienceDirect, IEEE Xplore, and PubMed. We introduce novel taxonomies to systematically categorize these works by model architecture, data modality, fusion strategy, and diagnostic objective. Our analysis reveals key trends, such as the rise of hybrid CViT frameworks, and critical gaps, including a limited focus on Mild Cognitive Impairment-to-AD progression. Critically, we also assess practical implementation details, revealing widespread challenges in algorithmic reproducibility. The discussion culminates in a forward-looking analysis of Large Vision Models and proposes future directions emphasizing the need for robust multimodal integration, lightweight transformer designs, and Explainable AI to advance AD research and bridge the critical gap between high-performance modeling and clinical applicability.

阿尔茨海默病(AD)是一项重大的公共卫生挑战,需要准确的早期诊断来改善患者的预后。视觉变压器(ViTs)和卷积视觉变压器(CViTs)已经成为这项任务的强大深度学习架构。遵循PRISMA指南,本系统综述分析了从五个主要数据库(Scopus, Web of Science, ScienceDirect, IEEE explore和PubMed)的564篇出版物(2021-2025)中选择的68项研究。我们引入新的分类法,根据模型架构、数据模态、融合策略和诊断目标对这些作品进行系统分类。我们的分析揭示了关键趋势,例如混合cit框架的兴起,以及关键差距,包括对轻度认知障碍到ad进展的有限关注。重要的是,我们还评估了实际实施细节,揭示了算法可重复性方面的广泛挑战。讨论的高潮是对大视觉模型的前瞻性分析,并提出了未来的方向,强调需要强大的多模态集成、轻量级变压器设计和可解释的人工智能来推进AD研究,弥合高性能建模和临床适用性之间的关键差距。
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引用次数: 0
Exploring the bidirectional relationships between MRI resting-state functional connectivity networks and cardiovascular diseases: a Mendelian randomization study. 探索MRI静息状态功能连接网络与心血管疾病的双向关系:一项孟德尔随机研究。
IF 4.5 Q1 Computer Science Pub Date : 2025-12-16 DOI: 10.1186/s40708-025-00285-8
Shiqiang Yang, Yuquan Wang, Ruiqin Han, Qi Zhang, Qing Gao, Hanjian Du, Xiaofei Hu

Objective: Brain functional connectivity alterations have been observed in cardiovascular diseases (CVDs), but the causality between brain resting-state functional connectivity networks and CVDs remains undetermined. We aimed to investigate the bidirectional causality between brain network connectivity and CVDs using Mendelian randomization (MR) analysis.

Methods: Using genome-wide association study (GWAS) data from the UK Biobank (n = 34,691), we conducted bidirectional two-sample MR analyses between 191 resting-state functional MRI phenotypes and four major CVDs: hypertension, atrial fibrillation (AF), heart failure (HF), and coronary artery disease (CAD). Sensitivity analyses, including MR-Egger regression and weighted median methods, were conducted to ensure the robustness of causal estimates and to test for potential pleiotropy.

Results: For hypertension, four networks showed negative causal associations (ORs 0.882-0.904), primarily involving motor, subcortical-cerebellar, default mode, and visual networks. In AF, we observed both increased connectivity in salience and default mode networks (ORs 1.157-1.288) and decreased connectivity in visual-motor networks (OR 0.790). For HF, three networks showed significant associations: decreased connectivity in visual and temporal networks (ORs 0.791-0.804) and increased connectivity in motor networks (OR 1.352). CAD was associated with increased connectivity in both default mode and central executive networks (ORs 1.145-1.147). These relationships remained robust after multiple sensitivity analyses.

Conclusion: Our findings reveal novel bidirectional causal relationships between specific brain functional networks and CVDs, with distinct patterns of network involvement for different CVDs suggesting disease-specific mechanisms in the cardio-cerebral axis. These findings identify potential neuroimaging biomarkers for early detection and monitoring of cardiovascular diseases.

目的:在心血管疾病(cvd)中观察到脑功能连接改变,但脑静息状态功能连接网络与cvd之间的因果关系尚未确定。我们的目的是利用孟德尔随机化(MR)分析来研究脑网络连接与心血管疾病之间的双向因果关系。方法:利用来自英国生物银行(UK Biobank)的全基因组关联研究(GWAS)数据(n = 34,691),我们对191个静息状态功能性MRI表型和四种主要cvd(高血压、心房颤动(AF)、心力衰竭(HF)和冠状动脉疾病(CAD))进行了双向双样本MR分析。进行敏感性分析,包括MR-Egger回归和加权中位数方法,以确保因果估计的稳健性,并检验潜在的多效性。结果:对于高血压,四个网络显示负因果关系(or 0.882-0.904),主要涉及运动网络、皮质下-小脑网络、默认模式网络和视觉网络。在AF中,我们观察到显著性和默认模式网络的连通性增加(OR为1.157-1.288),而视觉-运动网络的连通性下降(OR为0.790)。对于HF,三个网络表现出显著的关联:视觉和颞网络的连通性下降(OR 0.791-0.804),运动网络的连通性增加(OR 1.352)。CAD与默认模式和中央执行网络的连通性增加有关(ORs 1.145-1.147)。在多次敏感性分析后,这些关系仍然稳固。结论:我们的研究结果揭示了特定脑功能网络与cvd之间新的双向因果关系,不同cvd的网络参与模式不同,表明心脑轴的疾病特异性机制。这些发现确定了早期检测和监测心血管疾病的潜在神经成像生物标志物。
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引用次数: 0
Learning image derived PDE-phenotypes from fMRI data. 从fMRI数据中获得pde表型的学习图像。
IF 4.5 Q1 Computer Science Pub Date : 2025-12-08 DOI: 10.1186/s40708-025-00283-w
Ion Bica, Ryan Trang, Rui Hu, Wanhua Su, Zhichun Zhai, Qingrun Zhang

Partial differential equations (PDEs) model various physical phenomena, such as electromagnetic fields and fluid mechanics. Methods such as sparse identification of nonlinear dynamics (SINDy) and PDE-Net 2.0 have been developed to identify and model PDEs on the basis of data via sparse optimization and deep neural networks, respectively. While PDE models are less commonly applied to fMRI data, they have the potential to uncover hidden connections and essential components in brain activity. Using the ADHD200 dataset, we applied canonical independent component analysis (CanICA) and uniform manifold approximation (UMAP) for dimensionality reduction of fMRI data. We then used sparse ridge regression to identify PDEs from the reduced data, and applied significant PDE features for classification achieving high accuracy in distinguishing individuals with attention deficit hyperactivity disorder (ADHD). This study demonstrates a novel approach for extracting meaningful features from fMRI data for neurological disorder analysis to understand the role of oxygen transport (delivery & consumption) in the brain during neural activity, which is relevant for studying intracranial pathologies.

偏微分方程(PDEs)模拟各种物理现象,如电磁场和流体力学。非线性动力学稀疏识别(SINDy)和PDE-Net 2.0等方法分别通过稀疏优化和深度神经网络对数据进行pde识别和建模。虽然PDE模型很少应用于fMRI数据,但它们有可能揭示大脑活动中隐藏的联系和基本成分。利用ADHD200数据集,我们应用规范独立分量分析(CanICA)和均匀流形近似(UMAP)对fMRI数据进行降维。然后,我们使用稀疏脊回归从简化的数据中识别PDE,并应用显著的PDE特征进行分类,在区分注意缺陷多动障碍(ADHD)个体方面取得了很高的准确性。本研究展示了一种从fMRI数据中提取有意义特征的新方法,用于神经系统疾病分析,以了解神经活动期间大脑中氧气运输(输送和消耗)的作用,这与颅内病理研究相关。
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引用次数: 0
Boosting brain tumor detection with an optimized ResNet and explainability via Grad-CAM and LIME. 通过优化的ResNet和Grad-CAM和LIME提高脑肿瘤检测的可解释性。
IF 4.5 Q1 Computer Science Pub Date : 2025-12-05 DOI: 10.1186/s40708-025-00279-6
K Afnaan, C G Arunbalaji, Tripty Singh, Rishab Kumar, Ganesh R Naik

Detecting Brain Tumors is essential in medical imaging, as early and accurate diagnosis significantly improves treatment decisions and patient outcomes. Convolutional Neural Networks have demonstrated high efficiency in this domain, but their lack of interpretability remains a significant drawback for clinical adoption. This study explores the integration of Explainability techniques to enhance transparency in CNN-based classification and improve model performance through advanced optimization strategies. The primary research question addressed is how to improve the accuracy, generalization, and interpretability of CNNs for brain tumor Detection. While previous studies have demonstrated the effectiveness of deep learning for tumor detections, challenges such as class imbalance and overfitting of CNNs persist. To bridge this gap, we employ different dynamic learning rate modifiers, perform architectural enhancements, and apply XAI techniques, including Grad-CAM and LIME. Our experiments are conducted on three publicly available multiclass tumor datasets to ensure the generalizability of the proposed approach. Among the tested architectures, the enhanced ResNet model consistently outperformed others across all datasets, achieving the highest test accuracy, ranging from 99.36% to 99.65%. The techniques such as unfreezing layers, integrating various blocks, pooling, and dropout layers enhanced feature refinement and reduced overfitting. By incorporating XAI, we improve model interpretability, ensuring that clinically relevant regions in MRI scans are highlighted. These advancements contribute to highly reliable AI-assisted diagnostics, addressing significant challenges in medical image classification.

检测脑肿瘤在医学成像中是必不可少的,因为早期和准确的诊断可以显著改善治疗决策和患者的预后。卷积神经网络在这一领域表现出高效率,但其缺乏可解释性仍然是临床应用的一个重大缺点。本研究探索了可解释性技术的集成,以增强基于cnn的分类的透明度,并通过先进的优化策略提高模型性能。主要的研究问题是如何提高cnn在脑肿瘤检测中的准确性、泛化和可解释性。虽然之前的研究已经证明了深度学习对肿瘤检测的有效性,但cnn的类不平衡和过拟合等挑战仍然存在。为了弥补这一差距,我们采用了不同的动态学习率调节器,执行架构增强,并应用XAI技术,包括Grad-CAM和LIME。我们的实验是在三个公开可用的多类肿瘤数据集上进行的,以确保所提出方法的泛化性。在测试的架构中,增强的ResNet模型在所有数据集上的表现都优于其他模型,达到了最高的测试精度,范围从99.36%到99.65%。解冻层、集成各种块、池化和dropout层等技术增强了特征精细化并减少了过拟合。通过结合XAI,我们提高了模型的可解释性,确保MRI扫描中的临床相关区域被突出显示。这些进步有助于实现高度可靠的人工智能辅助诊断,解决医学图像分类方面的重大挑战。
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Brain Informatics
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