Model of Morphogenesis with Repelling Signaling

IF 1.4 4区 生物学 Q4 MATHEMATICAL & COMPUTATIONAL BIOLOGY Acta Biotheoretica Pub Date : 2022-12-20 DOI:10.1007/s10441-022-09454-2
A. Minarsky, S. Krymsky, C. Soulé, N. Morozova
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Abstract

The paper is devoted to a conceptual model of cell patterning, based on a generalized notion of the epigenetic code of a cell determining its state. We introduce the concept of signaling depending both upon the spatial distance between cells and the distance between their cell states (s-distance); signaling can repel cells in the space of cell states (s-space) or attract them. The influence of different types of repelling signaling on the evolution of cells is considered. Stabilizing signaling, namely a signaling monotonically decreasing with s-distance, causes the restoring of cell states after perturbations; destabilizing signaling, i.e., the one in which the signaling monotonically increases with s-distance, causes the appearance of pairs of cells with alternating cell states (one close to the state conventionally called “head”, and another close to the “tail” state). Non-monotonic (in s-space) signaling splits the cells into groups. The model shows that different types of signaling may provide different types of cellular patterns. General principles for applying this model to complex cellular structures are discussed.

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具有排斥信号的形态发生模型
本文致力于细胞模式的概念模型,基于细胞决定其状态的表观遗传密码的广义概念。我们引入了信号的概念,这取决于细胞之间的空间距离和细胞状态之间的距离(s-distance);信号可以在细胞状态空间(s空间)中排斥细胞或吸引细胞。考虑了不同类型的排斥信号对细胞进化的影响。稳定信号,即信号随s距离单调递减,使扰动后细胞状态恢复;不稳定信号,即信号随s距离单调增加的信号,导致细胞成对出现,细胞状态交替(一个接近通常称为“头”的状态,另一个接近“尾”状态)。非单调(在s空间)信号将细胞分成组。该模型表明,不同类型的信号可能提供不同类型的细胞模式。讨论了将该模型应用于复杂细胞结构的一般原理。
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来源期刊
Acta Biotheoretica
Acta Biotheoretica 生物-生物学
CiteScore
2.70
自引率
7.70%
发文量
19
审稿时长
3 months
期刊介绍: Acta Biotheoretica is devoted to the promotion of theoretical biology, encompassing mathematical biology and the philosophy of biology, paying special attention to the methodology of formation of biological theory. Papers on all kind of biological theories are welcome. Interesting subjects include philosophy of biology, biomathematics, computational biology, genetics, ecology and morphology. The process of theory formation can be presented in verbal or mathematical form. Moreover, purely methodological papers can be devoted to the historical origins of the philosophy underlying biological theories and concepts. Papers should contain clear statements of biological assumptions, and where applicable, a justification of their translation into mathematical form and a detailed discussion of the mathematical treatment. The connection to empirical data should be clarified. Acta Biotheoretica also welcomes critical book reviews, short comments on previous papers and short notes directing attention to interesting new theoretical ideas.
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