Epidemic dynamics in census-calibrated modular contact network.

IF 2 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Network Modeling and Analysis in Health Informatics and Bioinformatics Pub Date : 2023-01-01 DOI:10.1007/s13721-022-00402-1
Kirti Jain, Vasudha Bhatnagar, Sharanjit Kaur
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引用次数: 1

Abstract

Network-based models are apt for understanding epidemic dynamics due to their inherent ability to model the heterogeneity of interactions in the contemporary world of intense human connectivity. We propose a framework to create a wire-frame that mimics the social contact network of the population in a geography by lacing it with demographic information. The framework results in a modular network with small-world topology that accommodates density variations and emulates human interactions in family, social, and work spaces. When loaded with suitable economic, social, and urban data shaping patterns of human connectance, the network emerges as a potent decision-making instrument for urban planners, demographers, and social scientists. We employ synthetic networks to experiment in a controlled environment and study the impact of zoning, density variations, and population mobility on the epidemic variables using a variant of the SEIR model. Our results reveal that these demographic factors have a characteristic influence on social contact patterns, manifesting as distinct epidemic dynamics. Subsequently, we present a real-world COVID-19 case study for three Indian states by creating corresponding surrogate social contact networks using available census data. The case study validates that the demography-laced modular contact network reduces errors in the estimates of epidemic variables.

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人口普查校准模块化接触网络中的流行病动力学。
基于网络的模型适合于理解流行病动态,因为它们具有固有的能力,可以模拟人类紧密联系的当代世界中相互作用的异质性。我们提出了一个框架来创建一个线框,通过将其与人口统计信息捆绑在一起来模仿地理上人口的社会联系网络。该框架形成了一个具有小世界拓扑结构的模块化网络,可以适应密度变化,并模拟家庭、社会和工作空间中的人类互动。当装载了适当的经济、社会和城市数据来塑造人类联系模式时,网络就成为城市规划者、人口学家和社会科学家强有力的决策工具。我们使用合成网络在受控环境中进行实验,并使用SEIR模型的一种变体研究分区、密度变化和人口流动对流行病变量的影响。我们的研究结果表明,这些人口因素对社会接触模式具有特征性的影响,表现为独特的流行动态。随后,我们通过使用可用的人口普查数据创建相应的替代社会联系网络,为印度三个邦提供了一个真实的COVID-19案例研究。案例研究证实,人口统计学模块接触网络减少了流行病变量估计的误差。
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来源期刊
CiteScore
5.40
自引率
4.30%
发文量
43
期刊介绍: NetMAHIB publishes original research articles and reviews reporting how graph theory, statistics, linear algebra and machine learning techniques can be effectively used for modelling and analysis in health informatics and bioinformatics. It aims at creating a synergy between these disciplines by providing a forum for disseminating the latest developments and research findings; hence, results can be shared with readers across institutions, governments, researchers, students, and the industry. The journal emphasizes fundamental contributions on new methodologies, discoveries and techniques that have general applicability and which form the basis for network based modelling, knowledge discovery, knowledge sharing and decision support to the benefit of patients, healthcare professionals and society in traditional and advanced emerging settings, including eHealth and mHealth .
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