Use of polypyrrole-polystyrene membranes for extracting DNA from plant tissues

Q3 Biochemistry, Genetics and Molecular Biology Biomaterials and biosystems Pub Date : 2022-08-01 DOI:10.1016/j.bbiosy.2022.100060
Winnie Q. Brandão , Romário J. da Silva , Lizeth C. Mojica-Sánchez , Bruna G. Maciel , Gabriela P. Ratkovski , Celso P. de Melo
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引用次数: 1

Abstract

We describe the preparation of a membrane composed of polypyrrole-polystyrene (PPy-PS) and its application in DNA extraction. We adopted the electrospinning technique to prepare polystyrene (PS) membranes, which we used as substrates for incorporating polypyrrole chains through an in situ chemical procedure. As a model system, we initially investigated the use of PPy-PS membranes for the extraction of salmon sperm DNA from aqueous solutions. These studies have shown that the PPy-PS membrane has a maximum adsorption capacity of 236.0 mg of DNA per gram of PPy after 30 min of exposure to a DNA solution (100 mg/L). We incorporated the PPy-PS membranes into centrifugation columns, which we used to carry out experiments for extracting and purification of DNA from curly lettuce leaves. The protocol was initially optimized by first examining the most appropriate concentration of the three components of the lysis buffer (Tris/HCl, NaCl, and EDTA-Na). We then investigated the most adequate volumes of the concentrated surfactant solution (SDS 20%) and that used in the protein and polysaccharide precipitation step (5 M potassium acetate, pH 6.3), factors that directly influence the quality and quantity of the fraction of DNA obtained. For curly lettuce leaves, both in their mature and young stages, the yield and purity of the DNA purified using the PPy-PS membrane were comparable to those obtained using a commercial kit. In both cases, the collected DNA samples presented excellent integrity and quality. These results are suggestive that these composite membranes are competitive with the commercial kits available for the extraction and purification of DNA from plants.

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利用聚吡咯-聚苯乙烯膜从植物组织中提取DNA
介绍了聚吡咯-聚苯乙烯(PPy-PS)膜的制备及其在DNA提取中的应用。我们采用静电纺丝技术制备聚苯乙烯(PS)膜,并将其作为基底,通过原位化学过程将聚吡咯链结合在一起。作为一个模型系统,我们初步研究了使用PPy-PS膜从水溶液中提取鲑鱼精子DNA。这些研究表明,在DNA溶液(100 mg/L)中暴露30分钟后,PPy- ps膜的最大吸附容量为每克PPy 236.0 mg DNA。我们将PPy-PS膜放入离心柱中,我们用离心柱进行了从卷曲生菜叶中提取和纯化DNA的实验。首先对裂解缓冲液的三种成分(Tris/HCl、NaCl和EDTA-Na)的最合适浓度进行优化。然后,我们研究了浓缩表面活性剂溶液(SDS为20%)和用于蛋白质和多糖沉淀步骤的最适当体积(5 M醋酸钾,pH为6.3),以及直接影响所得DNA部分质量和数量的因素。对于卷曲的生菜叶片,无论是在成熟阶段还是在幼嫩阶段,使用py - ps膜纯化的DNA的产量和纯度与使用商业试剂盒获得的DNA相当。在这两种情况下,收集的DNA样本都表现出良好的完整性和质量。这些结果表明,这些复合膜可与商业试剂盒竞争,用于从植物中提取和纯化DNA。
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审稿时长
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