Solvent paramagnetic relaxation enhancement as a versatile method for studying structure and dynamics of biomolecular systems

IF 7.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Progress in Nuclear Magnetic Resonance Spectroscopy Pub Date : 2022-10-01 DOI:10.1016/j.pnmrs.2022.09.001
Aneta J. Lenard , Frans A.A. Mulder , Tobias Madl
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引用次数: 9

Abstract

Solvent paramagnetic relaxation enhancement (sPRE) is a versatile nuclear magnetic resonance (NMR)-based method that allows characterization of the structure and dynamics of biomolecular systems through providing quantitative experimental information on solvent accessibility of NMR-active nuclei. Addition of soluble paramagnetic probes to the solution of a biomolecule leads to paramagnetic relaxation enhancement in a concentration-dependent manner. Here we review recent progress in the sPRE-based characterization of structural and dynamic properties of biomolecules and their complexes, and aim to deliver a comprehensive illustration of a growing number of applications of the method to various biological systems. We discuss the physical principles of sPRE measurements and provide an overview of available co-solute paramagnetic probes. We then explore how sPRE, in combination with complementary biophysical techniques, can further advance biomolecular structure determination, identification of interaction surfaces within protein complexes, and probing of conformational changes and low-population transient states, as well as deliver insights into weak, nonspecific, and transient interactions between proteins and co-solutes. In addition, we present examples of how the incorporation of solvent paramagnetic probes can improve the sensitivity of NMR experiments and discuss the prospects of applying sPRE to NMR metabolomics, drug discovery, and the study of intrinsically disordered proteins.

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溶剂顺磁弛豫增强是研究生物分子体系结构和动力学的一种通用方法
溶剂顺磁弛豫增强(sPRE)是一种基于核磁共振(NMR)的通用方法,通过提供核磁共振活性核的溶剂可及性的定量实验信息,可以表征生物分子体系的结构和动力学。在生物分子溶液中加入可溶性顺磁探针,可使顺磁弛豫以浓度依赖的方式增强。本文综述了基于spre表征生物分子及其复合物的结构和动态特性的最新进展,并旨在全面说明该方法在各种生物系统中越来越多的应用。我们讨论了sPRE测量的物理原理,并提供了可用的共溶质顺磁探针的概述。然后,我们探讨了sPRE如何与互补的生物物理技术相结合,进一步推进生物分子结构的确定,蛋白质复合物内相互作用表面的鉴定,探测构象变化和低种群瞬态,以及对蛋白质与共溶质之间弱、非特异性和瞬态相互作用的见解。此外,我们还介绍了溶剂顺磁探针如何提高核磁共振实验灵敏度的例子,并讨论了将sPRE应用于核磁共振代谢组学、药物发现和内在无序蛋白质研究的前景。
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来源期刊
CiteScore
14.30
自引率
8.20%
发文量
12
审稿时长
62 days
期刊介绍: Progress in Nuclear Magnetic Resonance Spectroscopy publishes review papers describing research related to the theory and application of NMR spectroscopy. This technique is widely applied in chemistry, physics, biochemistry and materials science, and also in many areas of biology and medicine. The journal publishes review articles covering applications in all of these and in related subjects, as well as in-depth treatments of the fundamental theory of and instrumental developments in NMR spectroscopy.
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