Zhendong Liu, Yurong Yang, Xinrong Lv, Dongyan Li, Xi Chen, Xiaofeng Li
{"title":"Predicting Algorithms and Complexity in RNA Structure Based on BHG","authors":"Zhendong Liu, Yurong Yang, Xinrong Lv, Dongyan Li, Xi Chen, Xiaofeng Li","doi":"10.1109/CIS52066.2020.00081","DOIUrl":null,"url":null,"abstract":"It is a computing mode of basin hopping graph in RNA folding structural prediction including pseudoknots. We investigate the computing algorithm in RNA folding structural prediction based on extended structure and basin hopping graph. This study presents predicting algorithm based on extended structure, also presents an improved computing algorithm based on basin hopping graph, they are attractive approachs in RNA folding structural prediction. Many experiments have been implemented in Rfam14.2 database and PseudoBase database, the experimental results show our two algorithms are efficiently and accurately than other existing algorithm.","PeriodicalId":106959,"journal":{"name":"2020 16th International Conference on Computational Intelligence and Security (CIS)","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2020-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2020 16th International Conference on Computational Intelligence and Security (CIS)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CIS52066.2020.00081","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
It is a computing mode of basin hopping graph in RNA folding structural prediction including pseudoknots. We investigate the computing algorithm in RNA folding structural prediction based on extended structure and basin hopping graph. This study presents predicting algorithm based on extended structure, also presents an improved computing algorithm based on basin hopping graph, they are attractive approachs in RNA folding structural prediction. Many experiments have been implemented in Rfam14.2 database and PseudoBase database, the experimental results show our two algorithms are efficiently and accurately than other existing algorithm.
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