GeneGrid: From "Virtual" Bioinformatics Laboratory to "Smart" Bioinformatics Laboratory

Sachin Wasnik, Paul Donachy, T. Harmer, R. Perrott, P. Jithesh, M. McCurley, J. Johnston, M. Townsley, S. McKee
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引用次数: 1

Abstract

One of the challenges for the grid community is to develop services to support both shared computation and shared information. As apart of this development, it is necessary to convert laboratories to pervasive computing environments (smart laboratories) where data generated in the laboratories can be captured and published automatically; where information generated can be combined and compound with other laboratories' data on demand. In this paper, we describe one such initiative to capture and consume the data generated by the nucleotide sequencer in the grid enabled automated analysis system called GeneGrid developed at the Belfast e-Science Centre
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GeneGrid:从“虚拟”生物信息学实验室到“智能”生物信息学实验室
网格社区面临的挑战之一是开发既支持共享计算又支持共享信息的服务。作为这一发展的一部分,有必要将实验室转换为普适计算环境(智能实验室),在这种环境中,实验室生成的数据可以自动捕获和发布;生成的信息可以根据需要与其他实验室的数据进行组合和复合。在本文中,我们描述了在贝尔法斯特电子科学中心开发的称为GeneGrid的网格自动分析系统中捕获和使用核苷酸测序仪生成的数据的一个这样的倡议
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