A Pharmacovigilance Application of Social Media Mining: An Ensemble Approach for Automated Classification and Extraction of Drug

L. Robles, Rajath Chikkatur, J. Banda
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引用次数: 1

Abstract

Researchers have extensively used social media platforms like Twitter for knowl-edge discovery purposes, as tweets are considered a wealth of information that provides unique insights. Recent developments have further enabled social media mining for various biomedical tasks such as pharmacovigilance. A first step towards identifying a use-case of Twitter for the pharmacovigilance domain is to extract medication/drug terminologies mentioned in the tweets, which is a challenging task due to several reasons. For example, drug mentions in tweets may be incorrectly written, making the identification of these mentions more difficult. In this work, we propose a two step approach, first, we focused on classifying tweets with drug mentions via an ensemble model (containing transformer models), second, we extract drug mentions (along with their span positions) using a text-tagging/dictionary based approach, and a Named Entity Recognition (NER) approach. By comparing these two entity identification approaches, we demonstrate that using only a dictionary-based approach is not enough.
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社交媒体挖掘在药物警戒中的应用:一种药物自动分类与提取的集成方法
研究人员广泛使用Twitter等社交媒体平台来进行知识发现,因为Twitter被认为是提供独特见解的丰富信息。最近的发展进一步使社交媒体挖掘能够用于各种生物医学任务,如药物警戒。确定Twitter用于药物警戒领域的用例的第一步是提取Twitter中提到的药物/药物术语,由于几个原因,这是一项具有挑战性的任务。例如,推文中提到的药物可能写错了,这使得识别这些提及变得更加困难。在这项工作中,我们提出了一个两步的方法,首先,我们专注于通过集成模型(包含变压器模型)对含有药物提及的推文进行分类,其次,我们使用基于文本标记/字典的方法和命名实体识别(NER)方法提取药物提及(以及它们的跨度位置)。通过比较这两种实体识别方法,我们证明仅使用基于字典的方法是不够的。
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