{"title":"Comparison of three bioinformatics pipelines for DNA/RNA data processing","authors":"Jiang Lijun, Wenxian Yang, Rongshan Yu, Shiqian Wu, Anisha Anil Lekshmy","doi":"10.1109/ICIEA.2017.8282818","DOIUrl":null,"url":null,"abstract":"Most of the genetic instructions like growth, development, functioning, reproduction of all human beings are carried out by DNA molecule. The DNA and RNA are both nucleic acids, which contains proteins, carbohydrates, and one of three major types of macromolecule that are essential for all forms of life. In this project, we take the samples of the DNA and do testing and data processing with it. During the process for alignment and variant calling for DNA, we use three types of aligners and three variant callers. The aligners are BWA, BOWTIE, and SNAP. The variant callers are SAMtools.","PeriodicalId":443463,"journal":{"name":"2017 12th IEEE Conference on Industrial Electronics and Applications (ICIEA)","volume":"285 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2017 12th IEEE Conference on Industrial Electronics and Applications (ICIEA)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/ICIEA.2017.8282818","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Most of the genetic instructions like growth, development, functioning, reproduction of all human beings are carried out by DNA molecule. The DNA and RNA are both nucleic acids, which contains proteins, carbohydrates, and one of three major types of macromolecule that are essential for all forms of life. In this project, we take the samples of the DNA and do testing and data processing with it. During the process for alignment and variant calling for DNA, we use three types of aligners and three variant callers. The aligners are BWA, BOWTIE, and SNAP. The variant callers are SAMtools.
京公网安备 11010802042870号
京ICP备2023020795号-1
分享
求助内容：
应助结果提醒方式：
扫码关注我们
