Efficient Seed Volume Measurement Framework

Chendi Cao, M. Neilsen
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Abstract

Modern seed breeding programs require the ability to analyze seeds efficiently to be useful. Even simple measures such as volume and density can be challenging to compute efficiently with modest equipment. Accurately measuring seed volume becomes a highly under-constrained problem. Multiple images from different perspectives are required.This paper presents an efficient and affordable 3D single seed volume measurement system to extract image contours and compute volumes using a modified volume carving method in a controlled lab environment. The framework is constructed with a turntable, a stepper motor controlled by an Arduino microcontroller, three orthogonal cameras, and camera control via a modest computer used for data acquisition and processing. For testing, images are captured using only a side camera from different angles by rotating the turntable. Then, the framework processes the multiple images in parallel and reconstructs 3D seed objects to calculate the volume based on the voxel numbers. The proposed framework: (1) generates single seed 3D geometries for visualization, (2) calculates precise seed volumes within seconds, and (3) achieves less than a 3% error rate on a reference ceramic sphere.
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高效种子体积测量框架
现代种子育种计划需要有效分析种子的能力。即使是体积和密度这样简单的测量方法,用一般的设备也很难进行有效的计算。准确测量种子体积成为一个高度欠约束的问题。需要来自不同角度的多个图像。本文提出了一种高效且经济的三维单种子体积测量系统,该系统在受控的实验室环境中使用改进的体积雕刻方法提取图像轮廓并计算体积。该框架由一个转台,一个由Arduino微控制器控制的步进电机,三个正交摄像机和摄像机控制组成,通过一台用于数据采集和处理的普通计算机。为了进行测试,通过旋转转盘,仅使用侧面相机从不同角度捕获图像。然后,该框架对多幅图像进行并行处理,并根据体素数重建三维种子对象,计算体积;提出的框架:(1)生成单个种子三维几何图形用于可视化;(2)在几秒内计算精确的种子体积;(3)在参考陶瓷球上实现小于3%的错误率。
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