How to use open source data to assess infection disease risk: A framework and applications

Qingchun Yan, Danhuai Guo, Wenjuan Cui, Jianhui Li, Yuanchun Zhou
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Abstract

Disease risk assessment plays an important role in controlling the diffusion of infectious diseases. It needs a large number of environmental, social, and economic development data in order to discover the pathogenic factors of a given disease. However, the conventional disease risk assessment is carried out mainly through the analysis of geographic data and non-geographic data released by officials. The assessment falls far behind the propagation of the diseases. To address the issue of government data lagging, we propose a disease risk assessment framework using the open source data. Our proposed framework includes five sections: Automatic Data Discovery, Data Organization, Computing resource calling, Model selection and Visualization. The process of data discovery and organization can be done automatically. Distributed computing resources are used and users can select the spatial analysis models interactively for prediction and visualization. The rabies disease example is implemented using the proposed framework and verifies the effectiveness and efficiency of our framework by good results.
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如何使用开源数据评估传染病风险:框架和应用
疾病风险评估在控制传染病传播中发挥着重要作用。它需要大量的环境、社会和经济发展数据,以便发现特定疾病的致病因素。然而,传统的疾病风险评估主要是通过对官方发布的地理数据和非地理数据进行分析来进行的。评估远远落后于疾病的传播。为了解决政府数据滞后的问题,我们提出了一个使用开源数据的疾病风险评估框架。我们提出的框架包括五个部分:自动数据发现、数据组织、计算资源调用、模型选择和可视化。数据发现和组织过程可以自动完成。利用分布式计算资源,用户可以交互式地选择空间分析模型进行预测和可视化。应用该框架对狂犬病进行了实例分析,取得了良好的效果,验证了该框架的有效性和高效性。
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