WEIGHTED ENTITY-LINKING AND INTEGRATION ALGORITHM FOR MEDICAL KNOWLEDGE GRAPH GENERATION

Noura E. Maghawry, Samy S. A. Ghoniemy, Eman Shaaban, Karim Emara
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Abstract

: Semantic data integration is the process of interrelating information from multiple heterogeneous resources. There is a need for representing data concepts and their relationships to eliminate heterogeneity among different data sources in healthcare management systems. Standardized medical ontologies provide predefined medical vocabulary serving as a stable interface for concepts related to medical data sources. However, different ontologies have different concepts although these concepts have logical relations between them such as the Human Disease Ontology and the Symptoms ontology. There aroused a need for a knowledge graph providing a reliable knowledge base for any intelligent healthcare expert advisor disease prediction system. The knowledge graph provides a model for linking and integrating different concepts having logical relationships such as diseases and their symptoms. Medical online website and encyclopedia provides a reliable source for building such a knowledge graph. The knowledge graph is enriched with social networks data where information extracted reflects a major source of data based on user experiences. The paper proposes a framework for constructing a disease-symptom entity linked knowledge graph based on online medical encyclopedia and social networks user experiences. Entity linking such an integrated knowledge graph with standardized medical ontologies makes it a reliable knowledge base for a standard system that could be used by social networks user and the professional staff.
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医学知识图谱生成的加权实体链接与集成算法
语义数据集成是将来自多个异构资源的信息相互关联的过程。有必要表示数据概念及其关系,以消除医疗管理系统中不同数据源之间的异质性。标准化医学本体提供预定义的医学词汇表,作为与医学数据源相关的概念的稳定接口。然而,不同的本体有着不同的概念,尽管这些概念之间有逻辑关系,如人类疾病本体和症状本体。因此,需要一种知识图谱,为任何智能医疗专家顾问疾病预测系统提供可靠的知识库。知识图提供了一个模型,用于链接和集成具有逻辑关系的不同概念,例如疾病及其症状。医学在线网站和百科全书为构建这种知识图谱提供了可靠的来源。社交网络数据丰富了知识图谱,其中提取的信息反映了基于用户体验的主要数据来源。提出了一种基于在线医学百科全书和社交网络用户体验的疾病-症状实体关联知识图谱构建框架。将这种集成的知识图谱与标准化的医学本体连接起来的实体,使其成为一个可靠的标准系统知识库,可供社交网络用户和专业人员使用。
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