A. Mukhopadhyay, U. Maulik, S. Bandyopadhyay, R. Eils
{"title":"Mining association rules from HIV-human protein interactions","authors":"A. Mukhopadhyay, U. Maulik, S. Bandyopadhyay, R. Eils","doi":"10.1109/ICSMB.2010.5735401","DOIUrl":null,"url":null,"abstract":"Identifying possible viral-host protein-protein interactions is an important and useful approach in developing new drugs targeting those interactions. In this article, a recently published dataset containing records of interactions between a set of HIV-1 proteins and a set of human proteins has been analyzed using association rule mining. The main objective is to identify a set of association rules among the human proteins with high confidence. The well-known Apriori algorithm has been utilized for discovering the association rules. Moreover, we have predicted some new viral-human interactions based on the discovered association rules.","PeriodicalId":297136,"journal":{"name":"2010 International Conference on Systems in Medicine and Biology","volume":"31 5 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2010-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"19","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2010 International Conference on Systems in Medicine and Biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/ICSMB.2010.5735401","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 19
Abstract
Identifying possible viral-host protein-protein interactions is an important and useful approach in developing new drugs targeting those interactions. In this article, a recently published dataset containing records of interactions between a set of HIV-1 proteins and a set of human proteins has been analyzed using association rule mining. The main objective is to identify a set of association rules among the human proteins with high confidence. The well-known Apriori algorithm has been utilized for discovering the association rules. Moreover, we have predicted some new viral-human interactions based on the discovered association rules.