Mark Van der Merwe, Vinu Joseph, Ganesh Gopalakrishnan
{"title":"Message Scheduling for Performant, Many-Core Belief Propagation","authors":"Mark Van der Merwe, Vinu Joseph, Ganesh Gopalakrishnan","doi":"10.1109/HPEC.2019.8916366","DOIUrl":null,"url":null,"abstract":"Belief Propagation (BP) is a message-passing algorithm for approximate inference over Probabilistic Graphical Models (PGMs), finding many applications such as computer vision, error-correcting codes, and protein-folding. While general, the convergence and speed of the algorithm has limited its practical use on difficult inference problems. As an algorithm that is highly amenable to parallelization, many-core Graphical Processing Units (GPUs) could significantly improve BP performance. Improving BP through many-core systems is non-trivial: the scheduling of messages in the algorithm strongly affects performance. We present a study of message scheduling for BP on GPUs. We demonstrate that BP exhibits a tradeoff between speed and convergence based on parallelism and show that existing message schedulings are not able to utilize this tradeoff. To this end, we present a novel randomized message scheduling approach, Randomized BP (RnBP), which outperforms existing methods on the GPU.","PeriodicalId":184253,"journal":{"name":"2019 IEEE High Performance Extreme Computing Conference (HPEC)","volume":"13 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2019-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2019 IEEE High Performance Extreme Computing Conference (HPEC)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/HPEC.2019.8916366","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 3
Abstract
Belief Propagation (BP) is a message-passing algorithm for approximate inference over Probabilistic Graphical Models (PGMs), finding many applications such as computer vision, error-correcting codes, and protein-folding. While general, the convergence and speed of the algorithm has limited its practical use on difficult inference problems. As an algorithm that is highly amenable to parallelization, many-core Graphical Processing Units (GPUs) could significantly improve BP performance. Improving BP through many-core systems is non-trivial: the scheduling of messages in the algorithm strongly affects performance. We present a study of message scheduling for BP on GPUs. We demonstrate that BP exhibits a tradeoff between speed and convergence based on parallelism and show that existing message schedulings are not able to utilize this tradeoff. To this end, we present a novel randomized message scheduling approach, Randomized BP (RnBP), which outperforms existing methods on the GPU.