Computational approaches to identify novel inhibitors for the drug‐ resistant Mycobacterium tuberculosis DprE1 enzyme

Q4 Environmental Science Indonesian Journal of Biotechnology Pub Date : 2023-09-29 DOI:10.22146/ijbiotech.80145
Chaitali Dhande, Devanshi Mistry, Anandakrishnan Karthic, Rajshri Singh, Sagar Hindurao Barage
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Abstract

Mycobacterium tuberculosis causes Tuberculosis (TB), which is a common but life‐debilitating disease. The continued development of resistance to frontline anti‐TB drugs such as isoniazid and rifampicin threatens the efficacy of currently available treatment procedures. This highlights the need to explore diverse approaches essential for drug development against multi‐drug‐resistant strains of tuberculosis. Drug development relies on the findings associated with novel protein targets, which play a crucial role in the disease life cycle. DprE1, an enzyme that plays a critical role in the cell wall synthesis of M. tuberculosis, has been recognized as a promising target for drug development. In the present study, based on previous experimental findings, seven mutant models of DprE1 involved in DprE1 resistance are predicted using homology modeling. Further, potential inhibitors are selected based on their efficacy and IC50 values. Shortlisted inhibitors are docked with the wild‐type and mutant structures of DprE1. The deduced inhibitor molecule (ZINC5) is found to possess high potential as a lead inhibitor for all the models of DprE1. It can be used to circumvent drug resistance in the current treatment regime.
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确定耐药结核分枝杆菌DprE1酶新抑制剂的计算方法
结核分枝杆菌引起结核病(TB),这是一种常见但使生命衰弱的疾病。对异烟肼和利福平等一线抗结核药物耐药性的持续发展威胁到目前可用治疗程序的有效性。这突出了探索多种方法的必要性,这些方法对于开发针对多重耐药结核病菌株的药物至关重要。药物开发依赖于新蛋白靶点的发现,这些蛋白靶点在疾病生命周期中起着至关重要的作用。DprE1是一种在结核分枝杆菌细胞壁合成中起关键作用的酶,已被认为是药物开发的一个有希望的靶标。本研究在前人实验结果的基础上,利用同源性模型预测了参与DprE1抗性的7种DprE1突变模型。此外,根据它们的功效和IC50值选择潜在的抑制剂。入围的抑制剂与DprE1的野生型和突变型结构对接。所得的抑制剂分子(ZINC5)在DprE1的所有模型中都具有作为先导抑制剂的高潜力。在目前的治疗方案中,它可以用来规避耐药性。
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来源期刊
Indonesian Journal of Biotechnology
Indonesian Journal of Biotechnology Environmental Science-Environmental Science (miscellaneous)
CiteScore
1.00
自引率
0.00%
发文量
20
审稿时长
12 weeks
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