Analysis of microRNA expression profiles involved oxidative stress in a deep tissue pressure injury

Xiaoying Wang, Hui Shan, Ju Zhang
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Abstract

Abstract Objective: To investigate the association between oxidative stress and the development of deep tissue pressure injury (DTPI) at the genetic level by analyzing microRNA (miRNA) expression profiles in DTPI tissues. Methods: A model of DTPI was established in three adult mice and three elderly mice, while another set of three adult mice and three elderly mice was used as controls. Wound tissues were stained with hematoxylin and eosin to observe the histological changes, and total RNA was extracted for high-throughput sequencing. Differentially expressed oxidative stress-related miRNAs were screened, and target genes were predicted using TargetScan (v5.0) and Miranda (v3.3a). Enrichment analysis of these genes was executed using the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases. Selected differentially expressed miRNAs were further validated by qRT-PCR. Results: The results showed that 128 miRNAs were associated with oxidative stress, among which 86 were down-regulated, and 42 were upregulated in the DTPI-elderly group; 21 were differentially expressed in the DTPI-adult group ( P <0.05). Moreover, the miRNA associated with oxidation stress between the two groups was miR-181a-1-3p. Its target genes mainly regulated MAPK and AGE pathways. qRT-PCR results showed that miR-181a-1-3p and miR-21a-5p were significantly downregulated in DTPI tissues. Conclusion: By analyzing miRNA expression profiles related to oxidative stress via a high-throughput sequencing system, this study sheds light on the potential pathological mechanisms underpinning DTPI.
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深层组织压力损伤中涉及氧化应激的microRNA表达谱分析
摘要目的:通过分析深层组织压力损伤(DTPI)组织中microRNA (miRNA)的表达谱,从遗传水平探讨氧化应激与DTPI发生的关系。方法:建立3只成年小鼠和3只老年小鼠DTPI模型,另设3只成年小鼠和3只老年小鼠作为对照。采用苏木精和伊红染色观察创面组织组织学变化,提取总RNA进行高通量测序。筛选氧化应激相关差异表达的mirna,并使用TargetScan (v5.0)和Miranda (v3.3a)预测靶基因。利用基因本体(GO)和京都基因与基因组百科全书(KEGG)数据库对这些基因进行富集分析。选择的差异表达mirna通过qRT-PCR进一步验证。结果:结果显示,与氧化应激相关的mirna有128个,其中dtpi -老年组下调86个,上调42个;dtpi -成年组差异表达21个(P <0.05)。此外,两组之间与氧化应激相关的miRNA为miR-181a-1-3p。其靶基因主要调控MAPK和AGE通路。qRT-PCR结果显示,miR-181a-1-3p和miR-21a-5p在DTPI组织中显著下调。结论:通过高通量测序系统分析与氧化应激相关的miRNA表达谱,本研究揭示了DTPI的潜在病理机制。
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