Overcoming computational challenges to realize meter- to submeter-scale resolution in cloud simulations using the super-droplet method

IF 4 3区 地球科学 Q1 GEOSCIENCES, MULTIDISCIPLINARY Geoscientific Model Development Pub Date : 2023-11-02 DOI:10.5194/gmd-16-6211-2023
Toshiki Matsushima, Seiya Nishizawa, Shin-ichiro Shima
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Abstract

Abstract. A particle-based cloud model was developed for meter- to submeter-scale-resolution simulations of warm clouds. Simplified cloud microphysics schemes have already made meter-scale-resolution simulations feasible; however, such schemes are based on empirical assumptions, and hence they contain huge uncertainties. The super-droplet method (SDM) is a promising candidate for cloud microphysical process modeling and is a particle-based approach, making fewer assumptions for the droplet size distributions. However, meter-scale-resolution simulations using the SDM are not feasible even on existing high-end supercomputers because of high computational cost. In the present study, we overcame challenges to realize such simulations. The contributions of our work are as follows: (1) the uniform sampling method is not suitable when dealing with a large number of super-droplets (SDs). Hence, we developed a new initialization method for sampling SDs from a real droplet population. These SDs can be used for simulating spatial resolutions between meter and submeter scales. (2) We optimized the SDM algorithm to achieve high performance by reducing data movement and simplifying loop bodies using the concept of effective resolution. The optimized algorithms can be applied to a Fujitsu A64FX processor, and most of them are also effective on other many-core CPUs and possibly graphics processing units (GPUs). Warm-bubble experiments revealed that the throughput of particle calculations per second for the improved algorithms is 61.3 times faster than those for the original SDM. In the case of shallow cumulous, the simulation time when using the new SDM with 32–64 SDs per cell is shorter than that of a bin method with 32 bins and comparable to that of a two-moment bulk method. (3) Using the supercomputer Fugaku, we demonstrated that a numerical experiment with 2 m resolution and 128 SDs per cell covering 13 8242×3072 m3 domain is possible. The number of grid points and SDs are 104 and 442 times, respectively, those of the highest-resolution simulation performed so far. Our numerical model exhibited 98 % weak scaling for 36 864 nodes, accounting for 23 % of the total system. The simulation achieves 7.97 PFLOPS, 7.04 % of the peak ratio for overall performance, and a simulation time for SDM of 2.86×1013 particle ⋅ steps per second. Several challenges, such as incorporating mixed-phase processes, inclusion of terrain, and long-time integrations, remain, and our study will also contribute to solving them. The developed model enables us to study turbulence and microphysics processes over a wide range of scales using combinations of direct numerical simulation (DNS), laboratory experiments, and field studies. We believe that our approach advances the scientific understanding of clouds and contributes to reducing the uncertainties of weather simulation and climate projection.
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利用超液滴方法克服云模拟中米到亚米尺度分辨率的计算难题
摘要建立了一种基于粒子的云模型,用于米到亚米尺度的暖云分辨率模拟。简化的云微物理方案已经使米尺度分辨率的模拟成为可能;然而,这些方案是基于经验假设的,因此它们包含巨大的不确定性。超级液滴方法(SDM)是云微物理过程建模的一个很有前途的候选方法,它是一种基于粒子的方法,对液滴大小分布的假设较少。然而,由于计算成本高,即使在现有的高端超级计算机上,使用SDM进行米级分辨率的模拟也不可行。在本研究中,我们克服了实现这种模拟的挑战。本工作的贡献如下:(1)均匀取样方法不适合处理大量的超液滴(SDs)。因此,我们开发了一种新的初始化方法来从真实的液滴群体中采样SDs。这些SDs可用于模拟米和亚米尺度之间的空间分辨率。(2)利用有效分辨率的概念,通过减少数据移动和简化循环体,对SDM算法进行了优化,实现了高性能。优化的算法可以应用于富士通A64FX处理器,其中大多数算法在其他多核cpu和可能的图形处理单元(gpu)上也有效。热泡实验表明,改进算法的每秒粒子计算吞吐量比原始SDM提高了61.3倍。在浅累积的情况下,使用每个单元32 - 64个SDs的新SDM的模拟时间比具有32个bin的bin方法短,与双矩bulk方法相当。(3)利用Fugaku超级计算机,我们证明了2 m分辨率和128个SDs / cell覆盖13 8242×3072 m3域的数值实验是可能的。网格点数和SDs数分别是目前最高分辨率模拟的104倍和442倍。我们的数值模型在36864个节点上显示出98%的弱缩放,占整个系统的23%。仿真实现了7.97 PFLOPS,总体性能峰值比为7.04%,SDM仿真时间为2.86×1013粒子·步/秒。一些挑战,如合并混合阶段过程、包含地形和长期集成,仍然存在,我们的研究也将有助于解决这些问题。开发的模型使我们能够使用直接数值模拟(DNS),实验室实验和现场研究相结合,在大范围内研究湍流和微物理过程。我们相信,我们的方法促进了对云的科学认识,并有助于减少天气模拟和气候预测的不确定性。
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来源期刊
Geoscientific Model Development
Geoscientific Model Development GEOSCIENCES, MULTIDISCIPLINARY-
CiteScore
8.60
自引率
9.80%
发文量
352
审稿时长
6-12 weeks
期刊介绍: Geoscientific Model Development (GMD) is an international scientific journal dedicated to the publication and public discussion of the description, development, and evaluation of numerical models of the Earth system and its components. The following manuscript types can be considered for peer-reviewed publication: * geoscientific model descriptions, from statistical models to box models to GCMs; * development and technical papers, describing developments such as new parameterizations or technical aspects of running models such as the reproducibility of results; * new methods for assessment of models, including work on developing new metrics for assessing model performance and novel ways of comparing model results with observational data; * papers describing new standard experiments for assessing model performance or novel ways of comparing model results with observational data; * model experiment descriptions, including experimental details and project protocols; * full evaluations of previously published models.
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