The Molecular Epidemiology of Clostridioides difficile Infection in Central India: A Prospective Observational Cohort Study

IF 2.1 Q3 MICROBIOLOGY Microbiology Research Pub Date : 2023-09-08 DOI:10.3390/microbiolres14030086
Rima Biswas, Nick Pinkham, Seth T. Walk, Qian Wang, Shrikant Ambalkar, Ashish R. Satav, Mark H. Wilcox, Rahul Reghunath, Kiran Chawla, Padmaja A. Shenoy, Amit R. Nayak, Aliabbas A. Husain, Dhananjay V. Raje, Rajpal Singh Kashyap, Tanya M. Monaghan
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Abstract

This prospective observational cohort study aimed to establish and compare baseline rates of Clostridioides difficile infection (CDI) in community and hospitalized patients in Nagpur and rural Melghat Maharashtra, including adults aged ≥18 years with a diagnosis of diarrhoea as defined as 3 or more loose stools in a 24 h period. All diarrhoeal samples were tested for CDI using the C. diff Quik Chek Complete enzyme immunoassay. C. difficile-positive stool samples were characterised by toxigenic culture, antimicrobial susceptibility testing and PCR ribotyping. C. difficile testing was performed on 1683 patients with acute diarrhoea. A total of 54 patients (3.21%; 95% CI: 2.42–4.17) tested positive for both the GDH antigen and free toxin. The risk factors for CDI included the presence of co-morbidities, antibiotic usage, and immunosuppression. The detected PCR ribotypes included 053-16, 017, 313, 001, 107, and 216. Our findings show that toxigenic C. difficile is an important but neglected aetiologic agent of infective diarrhoea in Central India. These results underscore the need to enhance the awareness and testing of patients with diarrhoea in India regarding the presence of toxigenic C. difficile, particularly in high-risk individuals with multiple co-morbidities, immunosuppression, and recent or ongoing antibiotic exposure or hospitalization.
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印度中部艰难梭菌感染的分子流行病学:一项前瞻性观察队列研究
这项前瞻性观察队列研究旨在建立和比较那格浦尔和梅尔加特马哈拉施特拉邦农村社区和住院患者艰难梭菌感染(CDI)的基线率,包括年龄≥18岁、诊断为腹泻的成年人,定义为24小时内3次或更多稀便。使用艰难梭菌快速检查全酶免疫测定法对所有腹泻样本进行CDI检测。采用产毒培养、药敏试验和PCR核分型对难辨梭菌阳性粪便进行鉴定。对1683例急性腹泻患者进行艰难梭菌检测。共54例(3.21%;95% CI: 2.42-4.17)对GDH抗原和游离毒素均检测呈阳性。CDI的危险因素包括合并症、抗生素使用和免疫抑制。检测到的PCR核糖型包括053-16、017、313、001、107和216。我们的研究结果表明,产毒素艰难梭菌是印度中部传染性腹泻的重要但被忽视的病原学因子。这些结果强调有必要提高印度腹泻患者对产毒艰难梭菌存在的认识和检测,特别是在有多种合并症、免疫抑制、最近或正在接触抗生素或住院的高危人群中。
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来源期刊
Microbiology Research
Microbiology Research MICROBIOLOGY-
CiteScore
1.90
自引率
6.70%
发文量
62
审稿时长
10 weeks
期刊介绍: Microbiology Research is an international, online-only, open access peer-reviewed journal which publishes original research, review articles, editorials, perspectives, case reports and brief reports to benefit researchers, microbiologists, physicians, veterinarians. Microbiology Research publishes ‘Clinic’ and ‘Research’ papers divided into two different skill and proficiency levels: ‘Junior’ and ‘Professional’. The aim of this four quadrant grid is to encourage younger researchers, physicians and veterinarians to submit their results even if their studies encompass just a limited set of observations or rely on basic statistical approach, yet upholding the customary sound approach of every scientific article.
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