Quantitative structure activity relationship (QSAR) modeling study of some novel thiazolidine 4-one derivatives as potent anti-tubercular agents.

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Receptors and Signal Transduction Pub Date : 2023-06-01 Epub Date: 2024-01-11 DOI:10.1080/10799893.2023.2281671
Anguraj Moulishankar, Sundarrajan Thirugnanasambandam
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Abstract

This study aims to develop a QSAR model for Antitubercular activity. The quantitative structure-activity relationship (QSAR) approach predicted the thiazolidine-4-ones derivative's Antitubercular activity. For the QSAR study, 53 molecules with Antitubercular activity on H37Rv were collected from the literature. Compound structures were drawn by ACD/Labs ChemSketch. The energy minimization of the 2D structure was done using the MM2 force field in Chem3D pro. PaDEL Descriptor software was used to construct the molecular descriptors. QSARINS software was used in this work to develop the 2D QSAR model. A series of thiazolidine 4-one with MIC data were taken from the literature to develop the QSAR model. These compounds were split into a training set (43 compounds) and a test set (10 compounds). The PaDEL software calculated 2300 descriptors for this series of thiazolidine 4-one derivatives. The best predictive Model 4, which has R2 of 0.9092, R2adj of 0.8950 and LOF parameter of 0.0289 identify a preferred fit. The QSAR study resulted in a stable, predictive, and robust model representing the original dataset. In the QSAR equation, the molecular descriptor of MLFER_S, GATSe2, Shal, and EstateVSA 6 positively correlated with Antitubercular activity. While the SpMAD_Dzs 6 is negatively correlated with Antitubercular activity. The high polarizability, Electronegativities, Surface area contributions and number of Halogen atoms in the thiazolidine 4-one derivatives will increase the Antitubercular activity.

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新型抗结核药物噻唑烷4- 1衍生物的定量构效关系(QSAR)建模研究。
本研究旨在建立抗结核活性的QSAR模型。定量构效关系(QSAR)方法预测了噻唑烷-4- 1衍生物的抗结核活性。在QSAR研究中,从文献中收集了53个对H37Rv具有抗结核活性的分子。用ACD/Labs ChemSketch绘制化合物结构。利用Chem3D pro中的MM2力场实现了二维结构的能量最小化。利用PaDEL Descriptor软件构建分子描述符。本文采用QSARINS软件建立二维QSAR模型。从文献中提取了一系列具有MIC数据的噻唑烷4- 1,建立了QSAR模型。这些化合物被分为训练集(43种化合物)和测试集(10种化合物)。PaDEL软件计算了这一系列噻唑烷4- 1衍生物的2300个描述符。最佳预测模型4的R2为0.9092,R2adj为0.8950,LOF参数为0.0289,优选拟合。QSAR研究产生了一个代表原始数据集的稳定、预测和稳健的模型。在QSAR方程中,MLFER_S、GATSe2、Shal和EstateVSA 6的分子描述子与抗结核活性呈正相关。而spmad_dzs6与抗结核活性呈负相关。噻唑烷4- 1衍生物的高极化率、高电负性、高表面积贡献和高卤素原子数将提高其抗结核活性。
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来源期刊
Journal of Receptors and Signal Transduction
Journal of Receptors and Signal Transduction 生物-生化与分子生物学
CiteScore
6.60
自引率
0.00%
发文量
19
审稿时长
>12 weeks
期刊介绍: Journal of Receptors and Signal Tranduction is included in the following abstracting and indexing services: BIOBASE; Biochemistry and Biophysics Citation Index; Biological Abstracts; BIOSIS Full Coverage Shared; BIOSIS Previews; Biotechnology Abstracts; Current Contents/Life Sciences; Derwent Chimera; Derwent Drug File; EMBASE; EMBIOLOGY; Journal Citation Reports/ Science Edition; PubMed/MedLine; Science Citation Index; SciSearch; SCOPUS; SIIC.
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