Crystal structure, intermolecular interactions, charge density distribution and ADME properties of 2-Amino-4-methylpyridinium (oxalate) 0.5: An experimental and theoretical study

IF 2.218 Q2 Chemistry Chemical Data Collections Pub Date : 2023-11-16 DOI:10.1016/j.cdc.2023.101100
Balasubramanian Hemalatha, Suganya Suresh, Kumaradhas Poomani
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Abstract

The titled salt was synthesized by adding 2-Amino-4-methyl pyridine and Oxalic acid at 1:1 ratio, crystallizes in P21/n space group. The crystal structure of the salt 2-amino-4-methylpyridinium oxalate has been determined from the single crystal X-ray analysis. The crystal structure reveals that a protonation process took place in the solid; this confirms the compound is a salt. The molecular structure of the salt forms hydrogen bonding interactions in the crystal. The crystal structure is stabilized by N–H···O and C–H···O type of interactions. The Hirshfeld surface and 2D fingerprint plot analysis has been performed to understand the weak and strong interactions of the salt molecule. The nitrogen atoms N1 and N2 of 2A4MP are hydrogen bonded with a carboxyl group of oxalate forms a R22(8) ring motif via intermolecular interactions N1–H1A···O1, N2–H2B···O2. The QTAIM analysis of electron density at the critical points of intermolecular interactions shows the charge density distribution of weak and strong interactions. The in-silico ADME predicts that the salt exhibits the drug-likeness property, high bioavailability and high gastrointestinal absorption.

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2-氨基-4-甲基吡啶(草酸)0.5的晶体结构、分子间相互作用、电荷密度分布和ADME性能的实验和理论研究
以2-氨基-4-甲基吡啶和草酸为原料,以1:1的比例加入合成了命名盐,在P21/n空间基团上结晶。用单晶x射线分析确定了2-氨基-4-甲基草酸吡啶盐的晶体结构。晶体结构表明固体中发生了质子化过程;这证实了这种化合物是一种盐。盐的分子结构在晶体中形成氢键相互作用。N-H··O和C-H··O型相互作用稳定了晶体结构。通过Hirshfeld表面和二维指纹图谱分析来了解盐分子之间的弱相互作用和强相互作用。2A4MP的氮原子N1和N2通过分子间相互作用(N1 - h1a··O1, N2 - h2b··O2)与草酸盐的一个羧基形成R22(8)环基序。分子间相互作用临界点电子密度的QTAIM分析显示了弱相互作用和强相互作用的电荷密度分布。硅ADME预测该盐具有与药物相似的特性、高生物利用度和高胃肠道吸收。
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Chemical Data Collections
Chemical Data Collections Chemistry-Chemistry (all)
CiteScore
6.10
自引率
0.00%
发文量
169
审稿时长
24 days
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