APDDD: Animal parasitic diseases and drugs database

IF 2 3区 农林科学 Q4 IMMUNOLOGY Comparative Immunology Microbiology and Infectious Diseases Pub Date : 2023-11-15 DOI:10.1016/j.cimid.2023.102096
Yilei Zhang , Guojun Chen , Siyi Zhou , Lingru He , Olalekan Opeyemi Ayanniyi , Qianming Xu , Congshan Yang , Zhenyu Yue
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Abstract

Animal parasitic diseases not only have an economic impact, but also have serious social and public health impacts. Although antiparasitic drugs can treat these diseases, it seems difficult for users to comprehensively utilize the information, due to incomplete and difficult data collection. Thus, there is an urgent need to establish a comprehensive database, that includes parasitic diseases and related drugs. In this paper, we develop a knowledge database dedicated to collecting and analyzing animal parasitic diseases and related drugs, named Animal Parasitic Diseases and Drugs Database (APDDD). The current version of APDDD includes animal parasitic disease data of 8 major parasite classifications that cause common parasitic diseases and 96 subclass samples mined from many literature and authoritative books, as well as 182 antiparasitic drugs. Furthermore, we utilized APDDD data to add a knowledge graph representing the relationships between parasitic diseases, drugs, and the targeted gene of drugs acting on parasites. We hope that APDDD will become a good database for animal parasitic diseases and antiparasitic drugs research and that users can gain a more intuitive understanding of the relationships between parasitic diseases, drugs, and targeted genes through the knowledge graph.

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动物寄生虫病和药物数据库
动物寄生虫病不仅具有经济影响,而且具有严重的社会和公共卫生影响。虽然抗寄生虫药物可以治疗这些疾病,但由于数据收集的不完整和困难,用户似乎很难综合利用这些信息。因此,迫切需要建立一个全面的数据库,其中包括寄生虫病和有关药物。本文开发了一个专门收集和分析动物寄生虫病及相关药物的知识库,命名为动物寄生虫病及药物数据库(APDDD)。目前版本的APDDD收录了导致常见寄生虫病的8大类寄生虫的动物寄生虫病数据,以及从众多文献和权威书籍中挖掘的96个亚类样本,以及182种抗寄生虫药物。此外,我们利用APDDD数据添加了一个知识图,表示寄生虫病、药物和作用于寄生虫的药物靶向基因之间的关系。我们希望APDDD能够成为动物寄生虫病和抗寄生虫药物研究的良好数据库,用户可以通过知识图谱更直观地了解寄生虫病、药物和靶向基因之间的关系。
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来源期刊
CiteScore
4.60
自引率
0.00%
发文量
102
审稿时长
40 days
期刊介绍: Comparative Immunology, Microbiology & Infectious Diseases aims to respond to the concept of "One Medicine" and to provide a venue for scientific exchange. Based on the concept of "Comparative Medicine" interdisciplinary cooperation between specialists in human and animal medicine is of mutual interest and benefit. Therefore, there is need to combine the respective interest of physicians, veterinarians and other health professionals for comparative studies relevant to either human or animal medicine . The journal is open to subjects of common interest related to the immunology, immunopathology, microbiology, parasitology and epidemiology of human and animal infectious diseases, especially zoonotic infections, and animal models of human infectious diseases. The role of environmental factors in disease emergence is emphasized. CIMID is mainly focusing on applied veterinary and human medicine rather than on fundamental experimental research.
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