Detection of EGFR gene polymorphisms in non-small cell lung cancer Egyptian patients: a case-control study.

IF 2.7 4区 医学 Q2 GENETICS & HEREDITY Genes and Environment Pub Date : 2023-11-27 DOI:10.1186/s41021-023-00289-y
Omali Y El-Khawaga, Mohammed F Al-Azzawy, Afaf M ElSaid, Sherif Refaat, Aliaa N El-Dawa
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Abstract

Background: Non-Small Cell Lung Cancer displays several genetic mutations including epidermal growth factor receptor. This study's objective was to determine if the EGFR exon19 rs121913438 and exon21 rs121434568 variations play a role in NSCLC susceptibility.

Methods: Case-control research was done at the Mansoura university oncology center including 124 NSCLC patients, and 124 healthy volunteers. blood was used to obtain genomic DNA. ARMS-PCR was used to genotype single-nucleotide polymorphisms.

Results: Molecular study for EGFR exon 19 del. showed NSCLC cases were significantly associated with a higher proportion of heterozygous WD, WD + DD dominant genotypes, and mutant D allele, (p < 0.05 for each), with a risk to develop NSCLC. also, NSCLC cases were significantly associated with a higher proportion of heterozygous TG, TG + GG dominant genotype, G mutant allele, (p < 0.05 for each), with a risk to develop LC (OR > 1 for each). regarding the two EGFR mutations, TTF1 staining was significantly associated with WD + DD genotypes for EGFR exon 19 del But not EGFR exon 21. No substantial differences were found among all studied cases with CK7 or napsin A Tumor cytochemistry.

Conclusions: The WD heterozygous genotype and D allele in exon 19 del. mutation as well as the TG heterozygous and G allele in exon 21 substitution mutation in EGFR gene are strongly associated with the development of advanced-NSCLC in the Egyptians.

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埃及非小细胞肺癌患者EGFR基因多态性检测:一项病例对照研究
背景:非小细胞肺癌表现出包括表皮生长因子受体在内的几种基因突变。本研究的目的是确定EGFR外显子19 rs121913438和外显子21 rs121434568变异是否在NSCLC易感性中起作用。方法:在曼苏拉大学肿瘤中心进行病例对照研究,包括124例非小细胞肺癌患者和124例健康志愿者。血液被用来获取基因组DNA。采用ARMS-PCR对单核苷酸多态性进行基因分型。结果:EGFR外显子19 del的分子研究。结果显示,NSCLC病例与WD杂合型、WD + DD显性基因型和突变型D等位基因比例较高显著相关(p < 1)。对于两种EGFR突变,TTF1染色与EGFR外显子19 del的WD + DD基因型显著相关,但与EGFR外显子21无关。在所有研究病例中,CK7或napsin A的肿瘤细胞化学没有发现实质性差异。结论:WD杂合基因型和D等位基因存在于19 del外显子。EGFR基因21外显子突变中的TG杂合和G等位基因与埃及人晚期nsclc的发展密切相关。
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来源期刊
Genes and Environment
Genes and Environment Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
4.00
自引率
0.00%
发文量
24
审稿时长
27 weeks
期刊介绍: Genes and Environment is an open access, peer-reviewed journal that aims to accelerate communications among global scientists working in the field of genes and environment. The journal publishes articles across a broad range of topics including environmental mutagenesis and carcinogenesis, environmental genomics and epigenetics, molecular epidemiology, genetic toxicology and regulatory sciences. Topics published in the journal include, but are not limited to, mutagenesis and anti-mutagenesis in bacteria; genotoxicity in mammalian somatic cells; genotoxicity in germ cells; replication and repair; DNA damage; metabolic activation and inactivation; water and air pollution; ROS, NO and photoactivation; pharmaceuticals and anticancer agents; radiation; endocrine disrupters; indirect mutagenesis; threshold; new techniques for environmental mutagenesis studies; DNA methylation (enzymatic); structure activity relationship; chemoprevention of cancer; regulatory science. Genetic toxicology including risk evaluation for human health, validation studies on testing methods and subjects of guidelines for regulation of chemicals are also within its scope.
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