{"title":"Prognostic significance and expression pattern of glucose related genes in breast cancer: A comprehensive computational biology approach","authors":"Bader Alshehri","doi":"10.1016/j.sjbs.2023.103896","DOIUrl":null,"url":null,"abstract":"<div><p>Breast cancer (BC) is the most common type of malignancy globally and the main reason why women die from tumours. The Warburg effect, a characteristic of tumor, describes how most solid tumour cells acclimatize to their diverse surroundings by relying heavily on aerobic glycolysis for production of energy. In addition to producing key metabolic intermediates that are crucial for the production of macromolecules, which enable cancer cell division, invasiveness, and drug resistance, the transformed energy metabolism also supplies tumor cells with ATP for cellular energy. Here, we evaluated the expression profile, prognostic significance, and clinical relevance of glucose-related genes in BC using a bioinformatic approach. To clarify the significance of glucose-related genes in the development of breast tumours, we also performed a functional enrichment investigation of deregulated genes using the STRING and KEGG portal. The study depicted that of the 61 genes examined, 8 genes had a fold change </=± 1.5, that is, ADH1C, ADH4, ALDH1A3, ALDOC, FBP1, PCK1, PFKFB1, PFKFB3. Among the highly deregulated genes, ADH1C showed a fold change of −6.669. These deregulated genes were associated with poor prognosis. The study signifies that glucose related genes are highly dysregulated in breast cancer. Deregulation of glucose related genes is linked with a poor prognosis in BC individuals. Thus, targeting glucose related genes will provide an effective treatment approach for BC individuals.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 1","pages":"Article 103896"},"PeriodicalIF":4.4000,"publicationDate":"2023-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X23003418/pdfft?md5=d6b901ec135cdd09dd4b09c5587360f2&pid=1-s2.0-S1319562X23003418-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Saudi Journal of Biological Sciences","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1319562X23003418","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0
Abstract
Breast cancer (BC) is the most common type of malignancy globally and the main reason why women die from tumours. The Warburg effect, a characteristic of tumor, describes how most solid tumour cells acclimatize to their diverse surroundings by relying heavily on aerobic glycolysis for production of energy. In addition to producing key metabolic intermediates that are crucial for the production of macromolecules, which enable cancer cell division, invasiveness, and drug resistance, the transformed energy metabolism also supplies tumor cells with ATP for cellular energy. Here, we evaluated the expression profile, prognostic significance, and clinical relevance of glucose-related genes in BC using a bioinformatic approach. To clarify the significance of glucose-related genes in the development of breast tumours, we also performed a functional enrichment investigation of deregulated genes using the STRING and KEGG portal. The study depicted that of the 61 genes examined, 8 genes had a fold change </=± 1.5, that is, ADH1C, ADH4, ALDH1A3, ALDOC, FBP1, PCK1, PFKFB1, PFKFB3. Among the highly deregulated genes, ADH1C showed a fold change of −6.669. These deregulated genes were associated with poor prognosis. The study signifies that glucose related genes are highly dysregulated in breast cancer. Deregulation of glucose related genes is linked with a poor prognosis in BC individuals. Thus, targeting glucose related genes will provide an effective treatment approach for BC individuals.
期刊介绍:
Saudi Journal of Biological Sciences is an English language, peer-reviewed scholarly publication in the area of biological sciences. Saudi Journal of Biological Sciences publishes original papers, reviews and short communications on, but not limited to:
• Biology, Ecology and Ecosystems, Environmental and Biodiversity
• Conservation
• Microbiology
• Physiology
• Genetics and Epidemiology
Saudi Journal of Biological Sciences is the official publication of the Saudi Society for Biological Sciences and is published by King Saud University in collaboration with Elsevier and is edited by an international group of eminent researchers.