Circulating circRNA expression profile and its potential role in late recurrence of paroxysmal atrial fibrillation post catheter ablation.

IF 2.6 4区 医学 Q3 CARDIAC & CARDIOVASCULAR SYSTEMS Journal of Geriatric Cardiology Pub Date : 2023-11-28 DOI:10.26599/1671-5411.2023.11.006
Shan-Shan Liu, Hong-Yang Guo, Jian Zhu, Jin-Ling Ma, Sai-Zhe Liu, Kun-Lun He, Su-Yan Bian
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引用次数: 0

Abstract

Background: Catheter-based pulmonary vein isolation (PVI) is an effective and well-established intervention for symptomatic paroxysmal atrial fibrillation (PAF). Nevertheless, late recurrences of atrial fibrillation (LRAF) occurring during 3 to 12 months are common, and the underlying mechanisms remain elusive. Circular RNAs (circRNAs) in atrial tissue have been linked to the pathophysiological mechanisms and progression of PAF in a few studies. However, their expression patterns in peripheral blood and regulatory function in LRAF are not clear.

Methods: In the present study, the expression profile of circulating circRNAs in three paired nonvalvular PAF patients with or without LRAF was investigated by high-throughput sequencing and validated by quantitative real-time polymerase chain reaction (qRT-PCR). Bioinformatics analyses, including Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, and circRNA/miRNA regulatory network, were performed to predict the functions and potential regulatory roles of differentially expressed (DE) circRNAs.

Results: A total of 12,834 circRNAs, comprising 5,491 down-regulated and 7,343 up-regulated circRNAs, were found to be DE in blood smaples from the two groups in peripheral blood between LRAF and non-recurrence control individuals. The most enriched GO categories in terms of molecular function, biological process, and cellular component features were catalytic activity, cellular metabolic process, and intracellular part, respectively. The KEGG enrichment study revealed that the most important metabolic process controlled by DE circRNAs is endocytosis. In the circRNA/microRNAs interaction network, four up-regulated circRNAs (hsa_circ_0002665, hsa_circ_0001953, hsa_circ_0003831, and hsa_circ_0040533) and one down-regulated circRNA (hsa_circ_0041103) were predicted to play potential regulatory roles in the pathogenesis of LRAF.

Conclusions: This investigation discovered the expression pattern of circulating circRNAs that is indicative of PAF late recurrence, which may serve as risk markers or therapeutic targets for LRAF after PVI.

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循环 circRNA 表达谱及其在导管消融术后阵发性心房颤动晚期复发中的潜在作用。
背景:导管肺静脉隔离术(PVI)是治疗症状性阵发性心房颤动(PAF)的一种有效且行之有效的干预方法。然而,发生在 3 至 12 个月内的心房颤动晚期复发(LRAF)很常见,其潜在机制仍难以捉摸。在一些研究中,心房组织中的环状 RNA(circRNA)与 PAF 的病理生理机制和进展有关。然而,它们在外周血中的表达模式以及在 LRAF 中的调控功能尚不清楚:本研究采用高通量测序法研究了三例配对的非瓣膜性 PAF 患者(有或无 LRAF)的循环 circRNAs 表达谱,并通过定量实时聚合酶链反应(qRT-PCR)进行了验证。研究人员进行了生物信息学分析,包括基因本体(GO)、京都基因和基因组百科全书(KEGG)通路分析以及循环RNA/miRNA调控网络,以预测差异表达(DE)循环RNA的功能和潜在调控作用:结果发现,在LRAF和非复发对照组患者的两组外周血样本中,共有12834个circRNAs存在差异表达,其中5491个circRNAs下调,7343个circRNAs上调。在分子功能、生物过程和细胞组分特征方面,富集最多的GO类别分别是催化活性、细胞代谢过程和细胞内部分。KEGG 富集研究显示,DE circRNAs 控制的最重要的代谢过程是内吞。在circRNA/microRNAs相互作用网络中,4个上调的circRNAs(hsa_circ_0002665、hsa_circ_0001953、hsa_circ_0003831和hsa_circ_0040533)和1个下调的circRNAs(hsa_circ_0041103)被预测在LRAF的发病机制中发挥潜在的调控作用:结论:这项研究发现了循环循环RNA的表达模式,这种表达模式对PAF晚期复发具有指示作用,可作为PVI术后LRAF的风险标记或治疗靶点。
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来源期刊
Journal of Geriatric Cardiology
Journal of Geriatric Cardiology CARDIAC & CARDIOVASCULAR SYSTEMS-GERIATRICS & GERONTOLOGY
CiteScore
3.30
自引率
4.00%
发文量
1161
期刊介绍: JGC focuses on both basic research and clinical practice to the diagnosis and treatment of cardiovascular disease in the aged people, especially those with concomitant disease of other major organ-systems, such as the lungs, the kidneys, liver, central nervous system, gastrointestinal tract or endocrinology, etc.
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