A cluster investigation of Candida auris among hospitalized incarcerated patients

April N. McDougal, Mary Ann DeMaet, Bobbiejean Garcia, Teresa York, Thomas Iverson, Olugbenga Ojo, Janak Patel
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Abstract

Abstract Objective: Investigate and mitigate a cluster of Candida auris cases among incarcerated patients in a maximum-security prison hospital utilizing contact tracing, screening, whole genome sequencing, and environmental sampling and decontamination. Design: Outbreak investigation. Setting: Inpatient prison hospital affiliated with an academic tertiary referral center. Patients: Inmates of the Texas Department of Criminal Justice. Methods: Epidemiologic and environmental investigations were conducted including contact tracing, point prevalence surveys, and environmental sampling. Whole genome sequencing was performed on positive patient isolates. Results: Following a clinical case of C. auris fungemia, 344 patients underwent C. auris surveillance screening. Eight (2.3%) patients were identified with C. auris colonization. All patients were male. Our index patient was the only clinical case and death. Whole genome sequencing was performed on the nine patient isolates. All isolates were clade III (Africa) and clustered together with the largest SNP difference being 21. Environmental cultures from 7 of 61 rooms (11.5%) were positive following terminal disinfection with bleach. Sites nearest to the patient were most often positive including the hospital bed rails and bedside table. The transmission cluster was successfully mitigated within 60 days of identification. Conclusions: Implementation of an aggressive surveillance and decontamination program resulted in mitigation of a C. auris transmission cluster among our incarcerated patients. This investigation provides valuable insight into C. auris transmission in the incarcerated population, which is not considered a classic high-risk population as well as the challenges faced to stop transmission in a facility that requires the use of shared patient environments.
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住院监禁患者中念珠菌的群集调查
摘要 目的:利用接触追踪、筛查、全基因组测序以及环境采样和净化等方法,调查并缓解一所最高戒备监狱医院中被监禁病人中的念珠菌病例群。设计:疫情调查。地点:一家学术性三级转诊中心的附属监狱医院。患者:德克萨斯州刑事司法部的囚犯。调查方法进行流行病学和环境调查,包括接触者追踪、点流行率调查和环境采样。对阳性患者分离物进行了全基因组测序。结果:在发现一例弓形体真菌血症临床病例后,344 名患者接受了弓形体真菌监测筛查。8名患者(2.3%)被确定为法氏囊菌定植。所有患者均为男性。我们的指标病人是唯一的临床病例和死亡病例。对九名患者的分离株进行了全基因组测序。所有分离株均为支系 III(非洲),并聚集在一起,最大的 SNP 差异为 21。用漂白剂进行终端消毒后,61 个房间中有 7 个(11.5%)的环境培养物呈阳性。离病人最近的地方最常出现阳性,包括医院的床栏和床头柜。该传播集群在发现后的 60 天内被成功控制。结论:实施积极的监控和净化计划后,我们的监禁病人中的球孢子菌传播集群得以缓解。这项调查为我们深入了解阿氏杆菌在被监禁人群中的传播提供了宝贵的资料,因为被监禁人群并不被认为是典型的高风险人群,同时也为我们深入了解在需要使用共用患者环境的设施中阻止传播所面临的挑战提供了宝贵的资料。
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