Designing collagens to shed light on the multi-scale structure–function mapping of matrix disorders

Q1 Medicine Matrix Biology Plus Pub Date : 2024-02-01 Epub Date: 2023-12-14 DOI:10.1016/j.mbplus.2023.100139
Sonal Gahlawat , Vikas Nanda , David I. Shreiber
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Abstract

Collagens are the most abundant structural proteins in the extracellular matrix of animals and play crucial roles in maintaining the structural integrity and mechanical properties of tissues and organs while mediating important biological processes. Fibrillar collagens have a unique triple helix structure with a characteristic repeating sequence of (Gly-X-Y)n. Variations within the repetitive sequence can cause misfolding of the triple helix, resulting in heritable connective tissue disorders. The most common variations are single-point missense mutations that lead to the substitution of a glycine residue with a bulkier amino acid (Gly → X). In this review, we will first discuss the importance of collagen’s triple helix structure and how single Gly substitutions can impact its folding, structure, secretion, assembly into higher-order structures, and biological functions. We will review the role of “designer collagens,” i.e., synthetic collagen-mimetic peptides and recombinant bacterial collagen as model systems to include Gly → X substitutions observed in collagen disorders and investigate their impact on structure and function utilizing in vitro studies. Lastly, we will explore how computational modeling of collagen peptides, especially molecular and steered molecular dynamics, has been instrumental in probing the effects of Gly substitutions on structure, receptor binding, and mechanical stability across multiple length scales.

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设计胶原蛋白,揭示基质紊乱的多尺度结构-功能图谱
胶原蛋白是动物细胞外基质中最丰富的结构蛋白,在维持组织和器官的结构完整性和机械性能方面发挥着至关重要的作用,同时还能介导重要的生物过程。纤维状胶原具有独特的三螺旋结构,其特征性重复序列为 (Gly-X-Y)n。重复序列中的变异可导致三重螺旋的错误折叠,从而导致遗传性结缔组织疾病。最常见的变异是单点错义突变,这种突变会导致一个甘氨酸残基被一个体积更大的氨基酸取代(Gly → X)。在本综述中,我们将首先讨论胶原蛋白三螺旋结构的重要性,以及单个甘氨酸取代如何影响其折叠、结构、分泌、组装成高阶结构和生物功能。我们将回顾 "设计型胶原蛋白"(即合成胶原蛋白仿生肽和重组细菌胶原蛋白)作为模型系统的作用,其中包括在胶原紊乱中观察到的 Gly → X 取代,并利用体外研究调查它们对结构和功能的影响。最后,我们将探讨胶原蛋白肽的计算建模,尤其是分子和定向分子动力学建模,是如何在多个长度尺度上探究甘氨酸取代对结构、受体结合和机械稳定性的影响的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Matrix Biology Plus
Matrix Biology Plus Medicine-Histology
CiteScore
9.00
自引率
0.00%
发文量
25
审稿时长
105 days
期刊最新文献
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