Decoding the features and potential roles of respiratory burst oxidase homologs in bread wheat

IF 5.4 Q1 PLANT SCIENCES Current Plant Biology Pub Date : 2023-12-30 DOI:10.1016/j.cpb.2023.100315
Yashraaj Sharma , Ishu , Shumayla , Sameer Dixit , Kashmir Singh , Santosh Kumar Upadhyay
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Abstract

Respiratory burst oxidase homolog (RBOH) proteins in plants generate reactive oxygen species (ROS) in the apoplast to regulate developmental processes and stress responses. Herein, a total of 40 TaRBOH genes are identified in the genome of Triticum aestivum by a genome-wide search using the latest database. Phylogenetic analysis separated the RBOH proteins into five clusters and close clustering suggested an evolutionary relationship among them. The presence of duplication events (DEs) and the nature of selection (purifying) during evolutionary analysis revealed their role in the expansion of the TaRBOH gene family. The interaction analyses revealed their extended roles and coordinated functioning with various stress-related signaling pathways, including ABA- and Ca2+-signaling. Expression profiling in different tissue developmental stages and under stress conditions disclosed their involvement in growth, development and stress responses. In addition, the presence of assorted groups of cis-regulatory elements, interaction with the diverse nature of transcription factors and miRNA related to plant development, hormones and various stresses further suggested their association with developmental and stress-responsive pathways. This study provides inclusive information related to the functioning of TaRBOH genes in bread wheat and would provide a valuable reference for their functional characterization for crop improvement.

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解码面包小麦呼吸猝灭氧化酶同源物的特征和潜在作用
植物中的呼吸爆发氧化酶同源物(RBOH)蛋白在细胞凋亡体中产生活性氧(ROS),调节发育过程和胁迫反应。本文利用最新的数据库,通过全基因组搜索,在小麦(Triticum aestivum)基因组中发现了 40 个 TaRBOH 基因。系统进化分析将 RBOH 蛋白分为五个群,密切的聚类表明它们之间存在进化关系。在进化分析过程中,重复事件(DE)的存在和选择(纯化)的性质揭示了它们在 TaRBOH 基因家族扩展过程中的作用。相互作用分析表明了它们的扩展作用以及与各种胁迫相关信号通路(包括 ABA 信号和 Ca2+ 信号)的协调功能。不同组织发育阶段和胁迫条件下的表达谱分析显示,它们参与了生长、发育和胁迫响应。此外,各种顺式调控元件组的存在,以及与植物发育、激素和各种胁迫相关的转录因子和 miRNA 的相互作用进一步表明它们与发育和胁迫响应途径有关。这项研究提供了有关面包小麦中 TaRBOH 基因功能的全面信息,将为作物改良中的功能表征提供有价值的参考。
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来源期刊
Current Plant Biology
Current Plant Biology Agricultural and Biological Sciences-Plant Science
CiteScore
10.90
自引率
1.90%
发文量
32
审稿时长
50 days
期刊介绍: Current Plant Biology aims to acknowledge and encourage interdisciplinary research in fundamental plant sciences with scope to address crop improvement, biodiversity, nutrition and human health. It publishes review articles, original research papers, method papers and short articles in plant research fields, such as systems biology, cell biology, genetics, epigenetics, mathematical modeling, signal transduction, plant-microbe interactions, synthetic biology, developmental biology, biochemistry, molecular biology, physiology, biotechnologies, bioinformatics and plant genomic resources.
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