Gene-Specific Discriminative Echocardiogram Findings in Hypertrophic Cardiomyopathy Determined Using Artificial Intelligence: A Pilot Study

IF 0.5 Q4 CARDIAC & CARDIOVASCULAR SYSTEMS Cardiogenetics Pub Date : 2023-12-25 DOI:10.3390/cardiogenetics14010001
Milan Glavaški, Aleksandra Ilić, L. Velicki
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Abstract

Hypertrophic cardiomyopathy (HCM) is among the most common forms of cardiomyopathies, with a prevalence of 1:200 to 1:500 people. HCM is caused by variants in genes encoding cardiac sarcomeric proteins, of which a majority reside in MYH7, MYBPC3, and TNNT2. Up to 40% of the HCM cases do not have any known HCM variant. Genotype–phenotype associations in HCM remain incompletely understood. This study involved two visits of 46 adult patients with a confirmed diagnosis of HCM. In total, 174 genes were analyzed on the Next-Generation Sequencing platform, and transthoracic echocardiography was performed. Gene-specific discriminative echocardiogram findings were identified using the computer vision library Fast AI. This was accomplished with the generation of deep learning models for the classification of ultrasonic images based on the underlying genotype and a later analysis of the most decisive image regions. Gene-specific echocardiogram findings were identified: for variants in the MYH7 gene (vs. variant not detected), the most discriminative structures were the septum, left ventricular outflow tract (LVOT) segment, anterior wall, apex, right ventricle, and mitral apparatus; for variants in MYBPC3 gene (vs. variant not detected) these were the septum, left ventricle, and left ventricle/chamber; while for variants in the TNNT2 gene (vs. variant not detected), the most discriminative structures were the septum and right ventricle.
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利用人工智能确定肥厚型心肌病的基因特异性超声心动图结果:试点研究
肥厚型心肌病(HCM)是最常见的心肌病之一,发病率为 1:200 至 1:500。肥厚性心肌病是由编码心脏肌纤维蛋白的基因变异引起的,其中大多数变异存在于 MYH7、MYBPC3 和 TNNT2 中。高达 40% 的 HCM 病例没有任何已知的 HCM 变异基因。人们对 HCM 基因型与表型之间的关系仍然不甚了解。本研究对 46 名确诊为 HCM 的成年患者进行了两次访问。在新一代测序平台上共分析了 174 个基因,并进行了经胸超声心动图检查。利用计算机视觉库 "快速人工智能 "识别了基因特异性超声心动图结果。在此过程中,根据基础基因型生成了用于超声波图像分类的深度学习模型,随后对最具决定性的图像区域进行了分析。确定了基因特异性超声心动图结果:对于 MYH7 基因变异(与未检测到的变异相比),最具鉴别性的结构是室间隔、左心室流出道(LVOT)段、前壁、心尖、右心室和二尖瓣器;对于 MYBPC3 基因变异(与未检测到的变异相比),最具鉴别性的结构是室间隔、左心室流出道(LVOT)段、前壁、心尖、右心室和二尖瓣器。而对于 TNNT2 基因变异(与未检测到的变异相比),最具鉴别性的结构是室间隔和右心室。
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来源期刊
Cardiogenetics
Cardiogenetics CARDIAC & CARDIOVASCULAR SYSTEMS-
自引率
0.00%
发文量
26
审稿时长
11 weeks
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