Development of an Algorithm for Identification of N-terminal Acetyltransferases and Verification of Their Functional Activity

T. A. Kudryashov, M. V. Trunilina, V. V. Bykov, I. S. Boldaevsky, A. S. Sokolov, Yu. S. Lapteva
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Abstract

N-terminal acetyltransferases (NATs) of bacteria acetylate the alpha-amino group in amino acids and proteins, participate in the biosynthesis of lantibiotics, and inactivate a number of antibiotics. NATs are used in biotechnology for targeted acetylation of recombinant proteins and peptides. In this regard, the search for NATs that differ in terms of substrate specificity and are also capable of functioning in the reaction at elevated temperatures, a wide pH range, etc., seems relevant. In this work, we develop specific characteristics and a search algorithm for the identification of N-terminal acetyltransferases using the Thermus thermophilus thermophilic bacterium as an example. Out of 14 Abs annotated in the genome, we selected six «putative» NATs. Some of the genes encoding the selected NATs were successfully cloned, generated, and purified from E. coli cells. The specific enzymatic activity of a number of enzymes was confirmed.
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开发用于识别 N 端乙酰转移酶并验证其功能活性的算法
细菌的 N 端乙酰转移酶(NATs)可对氨基酸和蛋白质中的α-氨基进行乙酰化,参与兰特生物素的生物合成,并使多种抗生素失活。在生物技术中,NATs 可用于重组蛋白质和肽的定向乙酰化。在这方面,寻找底物特异性不同且能在高温、宽 pH 值范围等条件下进行反应的 NATs 似乎很有意义。在这项工作中,我们以嗜热菌(Thermus thermophilus)为例,开发了识别 N 端乙酰转移酶的具体特征和搜索算法。在基因组注释的 14 个 Abs 中,我们选择了 6 个 "推定 "NAT。我们从大肠杆菌细胞中成功克隆、生成和纯化了一些编码所选 NAT 的基因。一些酶的特异性酶活性得到了证实。
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