Computational insights on the adsorption of glycine, methionine, tyrosine and phenylalanine on the zinc oxide nanocluster Zn12O12

IF 1.6 4区 化学 Q4 CHEMISTRY, PHYSICAL Theoretical Chemistry Accounts Pub Date : 2024-01-16 DOI:10.1007/s00214-023-03087-5
Seyfeddine Rahali, Maamar Damous, Youghourta Belhocine, Najoua Sbei, Ridha Ben Said, Moussa Diawara, Mahamadou Seydou
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Abstract

The current work investigated the interaction of ZnO nanoparticles (NPs) with glycine, tyrosine, methionine and phenylalanine. (ZnO)12 cage-like cluster was modeled using the density functional theory to determine the adsorption energy, the preferred sites for adsorption of amino acids, and the electronic structure of the formed complexes. The findings suggest that pure amino acids interact with (ZnO)12 via a chemisorption process. The thermodynamic parameters computed showed that the complexation is an exothermic process and enthalpy-driven. The oxygen atoms in the carboxyl groups of the four studied amino acids are involved in the adsorption process. PHE_Zn12O12 exhibits the highest adsorption energy (− 207.50 kJ/mol) due to its interaction with the Zn12O12 nanocluster through two different adsorption sites. The electronic and sensing properties were examined by analyzing the HOMO and LUMO energies and the HOMO–LUMO energy gap (|ΔEg|). The sensitivity of Zn12O12 nanocluster toward the studied amino acids was examined by comparing the percentage variation of the gap after the adsorption, which can reach the value of 38%, suggesting the potential of Zn12O12 nanocluster as a promising sensor for the detection of amino acids. Interaction region indicator (IRI) analysis was performed for a visual understanding of the different interactions occurring between the amino acids and the Zn12O12 nanocluster. The results of this study can shed some light on the possible application of ZnO-based nanobiosensors for detecting protein tyrosine/tryptophan nitration as an early symptom of several serious chronic diseases.

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关于甘氨酸、蛋氨酸、酪氨酸和苯丙氨酸在纳米氧化锌簇 Zn12O12 上吸附的计算见解
目前的工作研究了氧化锌纳米粒子(NPs)与甘氨酸、酪氨酸、蛋氨酸和苯丙氨酸的相互作用。(利用密度泛函理论对(ZnO)12 笼状团簇进行了建模,以确定氨基酸的吸附能、首选吸附位点以及所形成复合物的电子结构。研究结果表明,纯氨基酸通过化学吸附过程与 (ZnO)12 发生相互作用。计算得出的热力学参数表明,络合是一个放热过程,由焓驱动。所研究的四种氨基酸的羧基中的氧原子参与了吸附过程。PHE_Zn12O12 具有最高的吸附能(- 207.50 kJ/mol),这是因为它通过两个不同的吸附位点与 Zn12O12 纳米簇相互作用。通过分析 HOMO 和 LUMO 能以及 HOMO-LUMO 能隙 (|ΔEg|),研究了电子和传感特性。通过比较吸附后能隙的百分比变化,考察了 Zn12O12 纳米团簇对所研究氨基酸的灵敏度。为了直观地了解氨基酸与 Zn12O12 纳米团簇之间发生的不同相互作用,对相互作用区域指示剂(IRI)进行了分析。这项研究的结果可以为基于氧化锌的纳米生物传感器在检测蛋白质酪氨酸/色氨酸硝化(几种严重慢性疾病的早期症状)方面的可能应用提供一些启示。
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来源期刊
Theoretical Chemistry Accounts
Theoretical Chemistry Accounts 化学-物理化学
CiteScore
3.40
自引率
0.00%
发文量
74
审稿时长
3.8 months
期刊介绍: TCA publishes papers in all fields of theoretical chemistry, computational chemistry, and modeling. Fundamental studies as well as applications are included in the scope. In many cases, theorists and computational chemists have special concerns which reach either across the vertical borders of the special disciplines in chemistry or else across the horizontal borders of structure, spectra, synthesis, and dynamics. TCA is especially interested in papers that impact upon multiple chemical disciplines.
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