In silico approach of 2,5-Diketopiperazines from marine organisms to neurodegenerative diseases

Rodrigo Chico-Merino, Antonio Rosales-López, Joel L. Terán, Alan Carrasco-Carballo
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Abstract

In this paper we present an in silico studies of new biological active of 2,5-Diketopiperazines candidates, from Marine Organisms to neurodegenerative diseases particular for the neurodegenerative central nervous system to Alzheimer's, Huntington and Parkinson’s diseases. A total of 35 DKPs were studied, by structural similarity analysis obtained MAO-A/B, β/γ-Secretase, COX-1/2 enzymes targets obtained, to continue molecular docking studies compared to endogenous substrates and reference inhibitors, finding a multitarget potential to increase dopamine levels and decrease β-amyloid and PGE2 levels, which makes them excellent molecules for studies against neurodegenerative diseases. DKP4, DKP23 and DKP25 as inhibitors of the 6 enzymes and DKP15, DKP19, DKP21, DKP26 and DKP33 for β-Secretease specifically, the rest with multitarget potential, denoting that the DKP ring serves as a base to generate multitarget or unitarget compounds through modifications in substituents. Finally, DKPs present low bioaccumulation in the body, no toxicity, high feasibility of crossing hematoencephalic membrane and activity on the CNS, which makes them an interesting set of molecules for the search for alternatives against neurodegenerative diseases.
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从海洋生物到神经退行性疾病的 2,5-二酮哌嗪的硅学方法
在本文中,我们对 2,5-二酮哌嗪候选化合物的新生物活性进行了硅学研究,这些候选化合物从海洋生物到神经退行性疾病,特别是神经退行性中枢神经系统疾病,如阿尔茨海默氏症、亨廷顿和帕金森氏症。共研究了 35 种 DKPs,通过结构相似性分析获得了 MAO-A/B、β/γ-分泌酶、COX-1/2 等酶的靶点,并与内源性底物和参考抑制剂进行了分子对接研究,发现它们具有提高多巴胺水平、降低β-淀粉样蛋白和 PGE2 水平的多靶点潜力,是研究神经退行性疾病的极佳分子。DKP4、DKP23 和 DKP25 是这 6 种酶的抑制剂,DKP15、DKP19、DKP21、DKP26 和 DKP33 专门针对 β-分解酶,其余的则具有多靶点潜力,这表明 DKP 环可作为基底,通过取代基的修饰生成多靶点或单靶点化合物。最后,DKPs 在体内的生物蓄积性低、无毒性、穿越血脑屏障的可行性高,并且在中枢神经系统中具有活性,这使它们成为寻找神经退行性疾病替代品的一组有趣的分子。
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