Natural language processing of multi-hospital electronic health records for public health surveillance of suicidality

Romain Bey, Ariel Cohen, Vincent Trebossen, Basile Dura, Pierre-Alexis Geoffroy, Charline Jean, Benjamin Landman, Thomas Petit-Jean, Gilles Chatellier, Kankoe Sallah, Xavier Tannier, Aurelie Bourmaud, Richard Delorme
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Abstract

There is an urgent need to monitor the mental health of large populations, especially during crises such as the COVID-19 pandemic, to timely identify the most at-risk subgroups and to design targeted prevention campaigns. We therefore developed and validated surveillance indicators related to suicidality: the monthly number of hospitalisations caused by suicide attempts and the prevalence among them of five known risks factors. They were automatically computed analysing the electronic health records of fifteen university hospitals of the Paris area, France, using natural language processing algorithms based on artificial intelligence. We evaluated the relevance of these indicators conducting a retrospective cohort study. Considering 2,911,920 records contained in a common data warehouse, we tested for changes after the pandemic outbreak in the slope of the monthly number of suicide attempts by conducting an interrupted time-series analysis. We segmented the assessment time in two sub-periods: before (August 1, 2017, to February 29, 2020) and during (March 1, 2020, to June 31, 2022) the COVID-19 pandemic. We detected 14,023 hospitalisations caused by suicide attempts. Their monthly number accelerated after the COVID-19 outbreak with an estimated trend variation reaching 3.7 (95%CI 2.1–5.3), mainly driven by an increase among girls aged 8–17 (trend variation 1.8, 95%CI 1.2–2.5). After the pandemic outbreak, acts of domestic, physical and sexual violence were more often reported (prevalence ratios: 1.3, 95%CI 1.16–1.48; 1.3, 95%CI 1.10–1.64 and 1.7, 95%CI 1.48–1.98), fewer patients died (p = 0.007) and stays were shorter (p < 0.001). Our study demonstrates that textual clinical data collected in multiple hospitals can be jointly analysed to compute timely indicators describing mental health conditions of populations. Our findings also highlight the need to better take into account the violence imposed on women, especially at early ages and in the aftermath of the COVID-19 pandemic.

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多医院电子健康记录的自然语言处理,用于自杀问题的公共卫生监测
我们迫切需要监测大量人群的精神健康状况,尤其是在 COVID-19 大流行等危机期间,以便及时发现风险最高的亚群,并设计有针对性的预防活动。因此,我们开发并验证了与自杀相关的监测指标:每月因自杀未遂而住院的人数以及其中五种已知风险因素的流行率。我们利用基于人工智能的自然语言处理算法,通过分析法国巴黎地区 15 家大学医院的电子病历,自动计算出了这些指标。我们通过一项回顾性队列研究评估了这些指标的相关性。通过对共同数据仓库中的 2,911,920 份记录进行分析,我们通过间断时间序列分析检验了大流行爆发后每月自杀未遂人数斜率的变化情况。我们将评估时间分为两个子时期:COVID-19 大流行之前(2017 年 8 月 1 日至 2020 年 2 月 29 日)和期间(2020 年 3 月 1 日至 2022 年 6 月 31 日)。我们发现有 14023 例因自杀未遂而住院的病例。COVID-19 疫情爆发后,自杀未遂的月发病率加速上升,趋势变异估计达到 3.7(95%CI 2.1-5.3),主要是受 8-17 岁女孩发病率上升(趋势变异 1.8,95%CI 1.2-2.5)的影响。大流行爆发后,家庭暴力、身体暴力和性暴力行为的报告更为频繁(流行率为 1.3,95%CI 为 1.2):1.3,95%CI 为 1.16-1.48;1.3,95%CI 为 1.10-1.64 和 1.7,95%CI 为 1.48-1.98),死亡患者人数减少(p = 0.007),住院时间缩短(p < 0.001)。我们的研究表明,可以对多家医院收集的临床文本数据进行联合分析,及时计算出描述人群精神健康状况的指标。我们的研究结果还突显出,有必要更好地考虑对妇女施加的暴力,尤其是在妇女幼年时期和 COVID-19 大流行之后。
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