Adding experimental precision to the realism of field observations: Plant communities structure bacterial communities in a glacier forefield

IF 4.3 2区 生物学 Q2 MICROBIOLOGY Environmental microbiology Pub Date : 2024-02-14 DOI:10.1111/1462-2920.16590
Xie He, Maximilian Hanusch, Laura Böll, Alexander Lach, Tobias Seifert, Robert R. Junker
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Abstract

Ecological studies are aligned along a realism–precision continuum ranging from field observations to controlled lab experiments that each have their own strengths and limitations. Ecological insight may be most robust when combining approaches. In field observations along a successional gradient, we found correlations between plant species composition and soil bacterial communities, while bacterial Shannon diversity was unrelated to vegetation characteristics. To add a causal understanding of the processes of bacterial community assembly, we designed lab experiments to specifically test the influence of plant composition on bacterial communities. Using soil and seeds from our field site, we added different combinations of surface-sterilised seeds to homogenised soil samples in microcosms and analysed bacterial communities 4 months later. Our results confirmed the field observations suggesting that experimental plant community composition shaped bacterial community composition, while Shannon diversity was unaffected. These results reflect intimate plant–bacteria interactions that are important drivers of plant health and community assembly. While this study provided insights into the role of plants underlying the assembly of bacterial communities, we did not experimentally manipulate other drivers of community assembly such as abiotic factors. Therefore, we recommend multi-factorial laboratory experiments to quantify the relative importance of different factors contributing to microbial composition.

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为实地观测的真实性增加实验精度:冰川前场的植物群落结构细菌群落。
生态学研究在现实性和精确性之间保持一致,从实地观测到实验室对照实验,各有其优势和局限性。如果能将各种方法结合起来,可能会对生态学有最深刻的认识。在沿演替梯度进行的实地观察中,我们发现植物物种组成与土壤细菌群落之间存在相关性,而细菌香农多样性与植被特征无关。为了进一步了解细菌群落组成过程的因果关系,我们设计了实验室实验,专门测试植物组成对细菌群落的影响。利用野外采集的土壤和种子,我们在微生态系统的均质土壤样本中添加了不同组合的表面灭菌种子,并在 4 个月后对细菌群落进行了分析。我们的结果证实了实地观察的结果,即实验植物群落的组成决定了细菌群落的组成,而香农多样性则不受影响。这些结果反映了植物与细菌之间密切的相互作用,这是植物健康和群落组合的重要驱动力。虽然这项研究深入揭示了植物在细菌群落组成中的基础作用,但我们并没有在实验中操纵群落组成的其他驱动因素,如非生物因素。因此,我们建议进行多因素实验室实验,以量化不同因素对微生物组成的相对重要性。
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来源期刊
Environmental microbiology
Environmental microbiology 环境科学-微生物学
CiteScore
9.90
自引率
3.90%
发文量
427
审稿时长
2.3 months
期刊介绍: Environmental Microbiology provides a high profile vehicle for publication of the most innovative, original and rigorous research in the field. The scope of the Journal encompasses the diversity of current research on microbial processes in the environment, microbial communities, interactions and evolution and includes, but is not limited to, the following: the structure, activities and communal behaviour of microbial communities microbial community genetics and evolutionary processes microbial symbioses, microbial interactions and interactions with plants, animals and abiotic factors microbes in the tree of life, microbial diversification and evolution population biology and clonal structure microbial metabolic and structural diversity microbial physiology, growth and survival microbes and surfaces, adhesion and biofouling responses to environmental signals and stress factors modelling and theory development pollution microbiology extremophiles and life in extreme and unusual little-explored habitats element cycles and biogeochemical processes, primary and secondary production microbes in a changing world, microbially-influenced global changes evolution and diversity of archaeal and bacterial viruses new technological developments in microbial ecology and evolution, in particular for the study of activities of microbial communities, non-culturable microorganisms and emerging pathogens
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