Modeling of Transformations during the Formation of Local Waves of SARS-CoV-2 Spreading at the Endemic Stage of the Pandemic

IF 0.8 4区 物理与天体物理 Q4 PHYSICS, APPLIED Technical Physics Letters Pub Date : 2024-02-09 DOI:10.1134/s1063785023700153
A. Yu. Perevaryukha
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Abstract

Most of the predictions made by the author at the end of 2022 about the development of scenarios for the coronavirus epidemic at the beginning of 2024 have been confirmed. There is a fungible set of changing SARS-CoV-2 strains, among which there is no longer a leader. In Asian countries, in December 2023, regional outbreaks of morbidity due to strains from a new branch of Omicron, BA.2.86, began, just like a year ago, although, in the summer between waves, the incidence of COVID-19 was low. The predicted nonlocal COVID outbreak is a positive feedback loop: the more infections, the higher the likelihood of further mutations in the virus and the greater chances of strains evading antibodies. It has been confirmed by a number of studies that repeated COVID often causes long-term and severe immunosuppression. The factor of post-COVID immunodeficiency and T-cell depletion in susceptible groups maintains a reservoir for the accumulation of SARS-CoV-2 mutations. This specific phenomenon was not taken into account in model predictions a year ago. The concept of the SIRS model is not applicable to SARS-CoV-2. Omicron’s many branches make it difficult to create a new vaccine. Antigenic drift makes it possible to bypass vaccine immunity, but global outbreaks are not observed for a long time due to the persistence of cytotoxic CD8+ T cells in us. From a dynamic point of view, the COVID-19 pandemic is divided into clusters of regional epidemics and demonstrates oscillatory dynamics. The oscillations have changed their character, with the wave crests becoming longer, although smaller in amplitude. Epidemic waves do not develop so rapidly, but grow gradually; however, this only increases the final number of cases. The damped amplitude of the waves of infection that formed after the initial outbreak again turns into an extreme peak. This may be due to effects after crisis events: mass infections or an increase in virulence of a new strain that evades the antibodies of vaccine immunity, but is destroyable. The two situations are different. We classified the observed local epidemic scenarios of COVID waves according to the types of oscillations from a physical point of view. COVID waves are no longer classic decaying relaxation oscillations. Using simulation modeling, we analyzed variants of epidemic dynamics with sharp changes. Special epidemic scenarios of the sudden occurrence of a short wave as a probable development of the current situation in 2024 were studied on the basis of nonlinear equations with a deviating argument. The COVID wave of the JN.1 strain in winter 2024 is the second fastest growing in cases of severe disease after the Omicron BA.1 wave in spring 2022 and will inevitably lead to a new impulse round in the evolution of the coronavirus.

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模拟 SARS-CoV-2 在大流行末期形成局部传播浪潮时的转变过程
摘要 作者在 2022 年底对 2024 年初冠状病毒疫情发展情况的预测大多得到了证实。SARS-CoV-2病毒株不断变化,其中不再有领头羊。在亚洲国家,与一年前一样,2023 年 12 月,Omicron 的一个新分支 BA.2.86 的毒株开始在地区范围内暴发流行,尽管在两次暴发之间的夏季,COVID-19 的发病率很低。预测的 COVID 非本地爆发是一个正反馈循环:感染越多,病毒进一步变异的可能性就越大,病毒株逃避抗体的机会也就越大。大量研究证实,反复感染 COVID 通常会导致长期和严重的免疫抑制。在易感人群中,COVID 后免疫缺陷和 T 细胞耗竭的因素为 SARS-CoV-2 变异的积累提供了储藏库。一年前的模型预测没有考虑到这一特殊现象。SIRS 模型的概念并不适用于 SARS-CoV-2。奥米克龙的许多分支使得制造新疫苗变得困难。抗原漂移使得绕过疫苗免疫成为可能,但由于我们体内细胞毒性 CD8+ T 细胞的持续存在,在很长一段时间内都不会观察到全球性爆发。从动态的角度来看,COVID-19 大流行分为区域流行群,并呈现出振荡动态。振荡的特征发生了变化,波峰变长,但振幅变小。流行病波的发展不再那么迅速,而是逐渐增加;然而,这只会增加最终的病例数。最初爆发后形成的感染波的阻尼振幅再次变成一个极高的峰值。这可能是由于危机事件后的影响:大规模感染或新菌株毒力增强,可躲避疫苗免疫抗体,但可被消灭。这两种情况是不同的。我们根据振荡的类型,从物理角度对观察到的 COVID 波的局部流行情况进行了分类。COVID 波不再是典型的衰减弛豫振荡。通过模拟建模,我们分析了具有急剧变化的流行动力学变体。在非线性方程偏离论证的基础上,研究了作为 2024 年当前形势可能发展的短波突然发生的特殊流行病情况。2024年冬季JN.1毒株的COVID浪潮是继2022年春季Omicron BA.1浪潮之后严重疾病病例增长速度第二快的浪潮,将不可避免地导致冠状病毒演变的新一轮冲击。
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来源期刊
Technical Physics Letters
Technical Physics Letters 物理-物理:应用
CiteScore
1.50
自引率
0.00%
发文量
44
审稿时长
2-4 weeks
期刊介绍: Technical Physics Letters is a companion journal to Technical Physics and offers rapid publication of developments in theoretical and experimental physics with potential technological applications. Recent emphasis has included many papers on gas lasers and on lasing in semiconductors, as well as many reports on high Tc superconductivity. The excellent coverage of plasma physics seen in the parent journal, Technical Physics, is also present here with quick communication of developments in theoretical and experimental work in all fields with probable technical applications. Topics covered are basic and applied physics; plasma physics; solid state physics; physical electronics; accelerators; microwave electron devices; holography.
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