Topographic Distribution of miRNAs (miR-30a, miR-223, miR-let-7a, miR-let-7f, miR-451, and miR-486) in the Plasma Extracellular Vesicles

IF 3.6 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Non-Coding RNA Pub Date : 2024-02-15 DOI:10.3390/ncrna10010015
Tatiana Petrova, Olga Kalinina, Arthur Aquino, E. Grigoryev, N. Dubashynskaya, Kseniya Zubkova, Anna Kostareva, A. Golovkin
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Abstract

There are many articles on the quantitative analysis of miRNAs contained in a population of EVs of different sizes under various physiological and pathological conditions. For such analysis, it is important to correctly quantify the miRNA contents of EVs. It should be considered that quantification is skewed depending on the isolation protocol, and different miRNAs are degraded by nucleases with different efficiencies. In addition, it is important to consider the contribution of miRNAs coprecipitating with the EVs population, because the amount of miRNAs in the EVs population under study is skewed without appropriate enzymatic treatment. By studying a population of EVs from the blood plasma of healthy donors, we found that the absolute amount of miRNA inside the vesicles is commensurate with the amount of the same type of miRNA adhered to the outside of the EVs. The inside/outside ratio ranged from 1.02 to 2.64 for different investigated miRNAs. According to our results, we propose the hypothesis that high occupancy of miRNAs on the outer surface of EVs influence on the transporting RNA repertoire no less than the inner cargo received from the host cell.
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血浆细胞外小泡中 miRNA(miR-30a、miR-223、miR-let-7a、miR-let-7f、miR-451 和 miR-486)的地形分布图
有许多文章对各种生理和病理条件下不同大小的EVs群体中所含的miRNA进行定量分析。要进行此类分析,必须正确量化 EVs 中的 miRNA 含量。需要考虑的是,不同的分离方案会使定量出现偏差,而且不同的 miRNA 被核酸酶降解的效率也不同。此外,考虑与 EVs 群体共沉淀的 miRNA 的贡献也很重要,因为如果没有适当的酶处理,所研究的 EVs 群体中 miRNA 的数量就会出现偏差。通过研究健康捐献者血浆中的 EVs 群体,我们发现囊泡内 miRNA 的绝对量与 EVs 外部附着的同类 miRNA 的量相称。不同研究的 miRNA 的内部/外部比率介于 1.02 至 2.64 之间。根据我们的研究结果,我们提出了一个假设:miRNA 在 EVs 外表面的高占有率对运输 RNA 的影响不亚于从宿主细胞接收的内部货物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Non-Coding RNA
Non-Coding RNA Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
6.70
自引率
4.70%
发文量
74
审稿时长
10 weeks
期刊介绍: Functional studies dealing with identification, structure-function relationships or biological activity of: small regulatory RNAs (miRNAs, siRNAs and piRNAs) associated with the RNA interference pathway small nuclear RNAs, small nucleolar and tRNAs derived small RNAs other types of small RNAs, such as those associated with splice junctions and transcription start sites long non-coding RNAs, including antisense RNAs, long ''intergenic'' RNAs, intronic RNAs and ''enhancer'' RNAs other classes of RNAs such as vault RNAs, scaRNAs, circular RNAs, 7SL RNAs, telomeric and centromeric RNAs regulatory functions of mRNAs and UTR-derived RNAs catalytic and allosteric (riboswitch) RNAs viral, transposon and repeat-derived RNAs bacterial regulatory RNAs, including CRISPR RNAS Analysis of RNA processing, RNA binding proteins, RNA signaling and RNA interaction pathways: DICER AGO, PIWI and PIWI-like proteins other classes of RNA binding and RNA transport proteins RNA interactions with chromatin-modifying complexes RNA interactions with DNA and other RNAs the role of RNA in the formation and function of specialized subnuclear organelles and other aspects of cell biology intercellular and intergenerational RNA signaling RNA processing structure-function relationships in RNA complexes RNA analyses, informatics, tools and technologies: transcriptomic analyses and technologies development of tools and technologies for RNA biology and therapeutics Translational studies involving long and short non-coding RNAs: identification of biomarkers development of new therapies involving microRNAs and other ncRNAs clinical studies involving microRNAs and other ncRNAs.
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