Large-scale correlation screening under dependence for brain functional connectivity network inference

IF 1.6 2区 数学 Q2 COMPUTER SCIENCE, THEORY & METHODS Statistics and Computing Pub Date : 2024-03-09 DOI:10.1007/s11222-024-10411-x
Hanâ Lbath, Alexander Petersen, Sophie Achard
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Abstract

Data produced by resting-state functional Magnetic Resonance Imaging are widely used to infer brain functional connectivity networks. Such networks correlate neural signals to connect brain regions, which consist in groups of dependent voxels. Previous work has focused on aggregating data across voxels within predefined regions. However, the presence of within-region correlations has noticeable impacts on inter-regional correlation detection, and thus edge identification. To alleviate them, we propose to leverage techniques from the large-scale correlation screening literature, and derive simple and practical characterizations of the mean number of correlation discoveries that flexibly incorporate intra-regional dependence structures. A connectivity network inference framework is then presented. First, inter-regional correlation distributions are estimated. Then, correlation thresholds that can be tailored to one’s application are constructed for each edge. Finally, the proposed framework is implemented on synthetic and real-world datasets. This novel approach for handling arbitrary intra-regional correlation is shown to limit false positives while improving true positive rates.

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大脑功能连接网络推断依赖性下的大规模相关性筛选
静息态功能磁共振成像产生的数据被广泛用于推断大脑功能连接网络。这些网络将神经信号关联起来,连接由依存体素组组成的大脑区域。以往的工作主要集中在汇总预定义区域内各体素的数据。然而,区域内相关性的存在会对区域间相关性检测产生明显影响,进而影响边缘识别。为了缓解这些问题,我们建议利用大规模相关性筛选文献中的技术,并推导出简单实用的相关性发现平均数量特征,灵活地纳入区域内依赖结构。然后提出了一个连通性网络推断框架。首先,对区域间相关性分布进行估算。然后,为每条边缘构建可根据应用定制的相关性阈值。最后,在合成数据集和真实数据集上实现了所提出的框架。结果表明,这种处理任意区域内相关性的新方法可以限制误报,同时提高真阳性率。
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来源期刊
Statistics and Computing
Statistics and Computing 数学-计算机:理论方法
CiteScore
3.20
自引率
4.50%
发文量
93
审稿时长
6-12 weeks
期刊介绍: Statistics and Computing is a bi-monthly refereed journal which publishes papers covering the range of the interface between the statistical and computing sciences. In particular, it addresses the use of statistical concepts in computing science, for example in machine learning, computer vision and data analytics, as well as the use of computers in data modelling, prediction and analysis. Specific topics which are covered include: techniques for evaluating analytically intractable problems such as bootstrap resampling, Markov chain Monte Carlo, sequential Monte Carlo, approximate Bayesian computation, search and optimization methods, stochastic simulation and Monte Carlo, graphics, computer environments, statistical approaches to software errors, information retrieval, machine learning, statistics of databases and database technology, huge data sets and big data analytics, computer algebra, graphical models, image processing, tomography, inverse problems and uncertainty quantification. In addition, the journal contains original research reports, authoritative review papers, discussed papers, and occasional special issues on particular topics or carrying proceedings of relevant conferences. Statistics and Computing also publishes book review and software review sections.
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