Non-invasive discrimination of adenocarcinoma and squamous cell carcinoma based on differential expression of miR-944 and miR-326 in sputum samples of lung cancer patients

IF 0.5 Q4 GENETICS & HEREDITY Human Gene Pub Date : 2024-02-27 DOI:10.1016/j.humgen.2024.201273
Mohammad Yazdanpour , Saeid Rahmani , Hadi Bayat , Hanifeh Mirtavoos-Mahyari , Adnan Khosravi , Seyed Javad Mowla
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Abstract

Lung cancer (LC) is the leading cause of cancer death globally, with late-stage detection contributing to poor prognosis and high mortality. Despite efforts to improve therapies, long-term survival rates have not significantly improved. Early detection of LC is crucial for better outcomes. Non-coding RNA molecules known as microRNAs (miRs) control the post-transcriptional regulation of gene expression and hold promise as biomarkers in LC patients' body fluids, such as sputum. This study aimed to develop a non-invasive diagnostic approach for distinguishing adenocarcinoma (ADC) and squamous cell carcinoma (SCC) subtypes of LC using identified candidate miRs from in-silico analysis of RNA sequencing datasets. The study utilized the Cancer Genome Atlas Program (TCGA) datasets and validated the findings through qRT-PCR analysis of sputum samples. The miR-944 and miR-326 were found to be significantly upregulated in SCC compared to ADC samples. Combining these miRs achieved excellent discrimination, effectively distinguishing SCC from ADC in LC with an AUC of 0.985. In conclusion, miR-944 and miR-326 show promise as potential biomarkers in sputum for differentiating between SCC and ADC in LC. These findings propose a non-invasive diagnostic approach that could facilitate early detection and improve patient outcomes for these specific subtypes of LC.

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基于肺癌患者痰液样本中 miR-944 和 miR-326 的差异表达对腺癌和鳞癌进行无创鉴别
肺癌(LC)是全球癌症死亡的主要原因,晚期发现导致预后差和死亡率高。尽管人们努力改进治疗方法,但长期生存率并没有显著提高。要想获得更好的治疗效果,早期发现乳腺癌至关重要。被称为微RNA(miRs)的非编码RNA分子控制着基因表达的转录后调控,有望成为LC患者体液(如痰液)中的生物标志物。本研究旨在开发一种非侵入性诊断方法,利用对 RNA 测序数据集进行校内分析后确定的候选 miRs 来区分 LC 的腺癌(ADC)和鳞癌(SCC)亚型。研究利用了癌症基因组图谱计划(TCGA)数据集,并通过对痰样本进行qRT-PCR分析验证了研究结果。研究发现,与ADC样本相比,miR-944和miR-326在SCC中明显上调。将这些 miRs 结合在一起可实现极佳的鉴别效果,能有效区分 LC 中的 SCC 和 ADC,AUC 为 0.985。总之,miR-944 和 miR-326 显示出作为痰中潜在生物标记物的前景,可用于区分 LC 中的 SCC 和 ADC。这些发现提出了一种非侵入性诊断方法,可促进早期检测并改善这些特定亚型 LC 患者的预后。
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来源期刊
Human Gene
Human Gene Biochemistry, Genetics and Molecular Biology (General), Genetics
CiteScore
1.60
自引率
0.00%
发文量
0
审稿时长
54 days
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