Improved nested U-structure for accurate nailfold capillary segmentation

IF 2.9 4区 医学 Q2 PERIPHERAL VASCULAR DISEASE Microvascular research Pub Date : 2024-03-13 DOI:10.1016/j.mvr.2024.104680
Qianyao Ye , Hao Yin , Jianan Lin , Junzhao Liang , Mugui Xie , Cong Ye , Bin Zhou , An Huang , Zhiwei Wu , Xiaosong Li , Yanxiong Wu
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Abstract

Changes in the structure and function of nailfold capillaries may be indicators of numerous diseases. Noninvasive diagnostic tools are commonly used for the extraction of morphological information from segmented nailfold capillaries to study physiological and pathological changes therein. However, current segmentation methods for nailfold capillaries cannot accurately separate capillaries from the background, resulting in issues such as unclear segmentation boundaries. Therefore, improving the accuracy of nailfold capillary segmentation is necessary to facilitate more efficient clinical diagnosis and research. Herein, we propose a nailfold capillary image segmentation method based on a U2-Net backbone network combined with a Transformer structure. This method integrates the U2-Net and Transformer networks to establish a decoder–encoder network, which inserts Transformer layers into the nested two-layer U-shaped architecture of the U2-Net. This structure effectively extracts multiscale features within stages and aggregates multilevel features across stages to generate high-resolution feature maps. The experimental results demonstrate an overall accuracy of 98.23 %, a Dice coefficient of 88.56 %, and an IoU of 80.41 % compared to the ground truth. Furthermore, our proposed method improves the overall accuracy by approximately 2 %, 3 %, and 5 % compared to the original U2-Net, Res-Unet, and U-Net, respectively. These results indicate that the Transformer–U2Net network performs well in nailfold capillary image segmentation and provides more detailed and accurate information on the segmented nailfold capillary structure, which may aid clinicians in the more precise diagnosis and treatment of nailfold capillary-related diseases.

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改进的嵌套 U 型结构可实现准确的甲沟毛细血管分割。
甲襞毛细血管结构和功能的变化可能是多种疾病的指标。无创诊断工具通常用于从分割的甲皱毛细血管中提取形态信息,以研究其中的生理和病理变化。然而,目前的甲沟毛细血管分割方法无法准确地将毛细血管与背景分开,导致分割边界不清晰等问题。因此,有必要提高甲襞毛细血管分割的准确性,以促进更有效的临床诊断和研究。在此,我们提出了一种基于 U2-Net 主干网结合 Transformer 结构的甲皱毛细血管图像分割方法。该方法将 U2-Net 和 Transformer 网络整合在一起,建立了一个解码器-编码器网络,在 U2-Net 的嵌套双层 U 型结构中插入 Transformer 层。这种结构能有效地提取阶段内的多尺度特征,并聚合跨阶段的多层次特征,从而生成高分辨率的特征图。实验结果表明,与地面实况相比,总体准确率为 98.23%,Dice 系数为 88.56%,IoU 为 80.41%。此外,与原始 U2-Net、Res-Unet 和 U-Net 相比,我们提出的方法分别提高了约 2%、3% 和 5%。这些结果表明,Transformer-U2Net 网络在甲沟毛细血管图像分割中表现良好,能提供更详细、更准确的甲沟毛细血管结构分割信息,有助于临床医生更精确地诊断和治疗甲沟毛细血管相关疾病。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Microvascular research
Microvascular research 医学-外周血管病
CiteScore
6.00
自引率
3.20%
发文量
158
审稿时长
43 days
期刊介绍: Microvascular Research is dedicated to the dissemination of fundamental information related to the microvascular field. Full-length articles presenting the results of original research and brief communications are featured. Research Areas include: • Angiogenesis • Biochemistry • Bioengineering • Biomathematics • Biophysics • Cancer • Circulatory homeostasis • Comparative physiology • Drug delivery • Neuropharmacology • Microvascular pathology • Rheology • Tissue Engineering.
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