Parageobacillus thermoglucosidasius as an emerging thermophilic cell factory

IF 6.8 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Metabolic engineering Pub Date : 2024-03-13 DOI:10.1016/j.ymben.2024.03.001
Miguel Paredes-Barrada , Panagiotis Kopsiaftis , Nico J. Claassens , Richard van Kranenburg
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Abstract

Parageobacillus thermoglucosidasius is a thermophilic and facultatively anaerobic microbe, which is emerging as one of the most promising thermophilic model organisms for metabolic engineering. The use of thermophilic microorganisms for industrial bioprocesses provides the advantages of increased reaction rates and reduced cooling costs for bioreactors compared to their mesophilic counterparts. Moreover, it enables starch or lignocellulose degradation and fermentation to occur at the same temperature in a Simultaneous Saccharification and Fermentation (SSF) or Consolidated Bioprocessing (CBP) approach. Its natural hemicellulolytic capabilities and its ability to convert CO to metabolic energy make P. thermoglucosidasius a potentially attractive host for bio-based processes. It can effectively degrade hemicellulose due to a number of hydrolytic enzymes, carbohydrate transporters, and regulatory elements coded from a genomic cluster named Hemicellulose Utilization (HUS) locus. The growing availability of effective genetic engineering tools in P. thermoglucosidasius further starts to open up its potential as a versatile thermophilic cell factory. A number of strain engineering examples showcasing the potential of P. thermoglucosidasius as a microbial chassis for the production of bulk and fine chemicals are presented along with current research bottlenecks. Ultimately, this review provides a holistic overview of the distinct metabolic characteristics of P. thermoglucosidasius and discusses research focused on expanding the native metabolic boundaries for the development of industrially relevant strains.

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作为新兴嗜热细胞工厂的副嗜热杆菌(Parageobacillus thermoglucosidasius)。
副嗜热杆菌(Parageobacillus thermoglucosidasius)是一种嗜热兼兼性厌氧微生物,正在成为代谢工程领域最有前途的嗜热模式生物之一。与中亲性微生物相比,使用嗜热微生物进行工业生物处理具有提高反应速率和降低生物反应器冷却成本的优势。此外,在同时糖化和发酵(SSF)或综合生物处理(CBP)方法中,它还能使淀粉或木质纤维素的降解和发酵在同一温度下进行。P. thermoglucosidasius 的天然半纤维素分解能力及其将 CO 转化为代谢能的能力,使其成为生物基工艺中具有潜在吸引力的宿主。它能有效降解半纤维素,这得益于其基因组群(名为半纤维素利用(HUS)基因座)中编码的多种水解酶、碳水化合物转运体和调控元件。P. thermoglucosidasius 的有效基因工程工具越来越多,进一步开启了其作为多功能嗜热细胞工厂的潜力。本综述介绍了一些菌株工程实例,展示了热葡糖酸杆菌作为微生物底盘生产大宗化学品和精细化学品的潜力,以及当前的研究瓶颈。最后,本综述全面概述了 P. thermoglucosidasius 的独特新陈代谢特征,并讨论了为开发工业相关菌株而进行的重点扩大本地新陈代谢范围的研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Metabolic engineering
Metabolic engineering 工程技术-生物工程与应用微生物
CiteScore
15.60
自引率
6.00%
发文量
140
审稿时长
44 days
期刊介绍: Metabolic Engineering (MBE) is a journal that focuses on publishing original research papers on the directed modulation of metabolic pathways for metabolite overproduction or the enhancement of cellular properties. It welcomes papers that describe the engineering of native pathways and the synthesis of heterologous pathways to convert microorganisms into microbial cell factories. The journal covers experimental, computational, and modeling approaches for understanding metabolic pathways and manipulating them through genetic, media, or environmental means. Effective exploration of metabolic pathways necessitates the use of molecular biology and biochemistry methods, as well as engineering techniques for modeling and data analysis. MBE serves as a platform for interdisciplinary research in fields such as biochemistry, molecular biology, applied microbiology, cellular physiology, cellular nutrition in health and disease, and biochemical engineering. The journal publishes various types of papers, including original research papers and review papers. It is indexed and abstracted in databases such as Scopus, Embase, EMBiology, Current Contents - Life Sciences and Clinical Medicine, Science Citation Index, PubMed/Medline, CAS and Biotechnology Citation Index.
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